Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60582g00001 ATGAGTTTCTGCATTGAACACATGATAGATGATGGAAGATGGCATGGGGTTGGAACATATCTCATTTATCTGATCAAGGAAAAAACCTATACATACATCACAAACAGCAAGAGTGATCAGAGAAAAATGGCATCATCAAGCTCTTACAACTCTCCATGTGCTGCTTGCAAATTCTTGAGGAGAAAATGTTTGCCAGGATGCATCTTTGCACCTTACTTCCCACCTGAAGAGCCCCAAAAATTCGCCAACGTTCACAAGATCTTCGGAGCAAGCAATGTTACCAAGCTTCTCAACGAGCTTCTGCCTCAGCAGAGGGAAGACGCTGTGAATTCTCTCGCGTATGAGGCAGAAGCTCGCGTGAGAGACCCTGTTTATGGCTGCGTTGGCGCCATCTCGTACCTTCAGAGACAAGTCCAAAGGCTCCAGAAAGAACTTGATGCCGCCAACGCGGATCTTCTTCGCTATGCTTGCAATGAAATCCCTCCTCCACATCATCATATCCCAACTTTAGCACCACCATTAACTCCAACAATTCATCATCAACTTACACAAAGGCACTTTGGTGGTACAAGAATTGGAAATGATCATGGATTTGGATTTTATAGGCAATCTCCAACCACTTACTTTCCTTATTCTCTTCCATGGAATGAGGACATCAATGGTGGAGGAGCTGAAGGAGGAGGTAATTTATGA 693 0.443 MSFCIEHMIDDGRWHGVGTYLIYLIKEKTYTYITNSKSDQRKMASSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVQRLQKELDAANADLLRYACNEIPPPHHHIPTLAPPLTPTIHHQLTQRHFGGTRIGNDHGFGFYRQSPTTYFPYSLPWNEDINGGGAEGGGNL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60582g00001 230 Coils Coil 228 230 - -
Stsc60582g00001 230 ProSiteProfiles LOB domain profile. 51 152 IPR004883 -
Stsc60582g00001 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 50 165 - -
Stsc60582g00001 230 Pfam Lateral organ boundaries (LOB) domain 52 149 IPR004883 -
Stsc60582g00001 230 Coils Coil 131 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60582g00001 Stsc-Chr60582 8328 14877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60582g00001 43 155 AS2 family AT5G63090 93.860 1.19e-72 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc60582g00001 LOB 6.1e-42 No_clan