Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60581g00014 ATGGGTGAAAATCATAATTCTTGGTTAAGGAGGACAAAATTCTCTCACACTGTGTGCCACCGCTTAAATCCTTCGACACTGGCTTTTATTCCTCTCAGCAATGAGACAGAGCACAATTCGGGTCTCAAGTCAAGGCCTTCGAGATCTTCTTCACCCTTGCCCGAAATTTTGCTTTCTGACACCTTTAGAGAGGCACGACATGATCAAAAGAGGTTTTCAACACCAGGTCCTAGGAGGAATTTAAGCAATAAGGGAAACATGGGCAAGTTGCAATGCAATGAGCTTGGGGAAAATAAGGTTTTGAGGTTGAAATTGCATTCCAATAGACCGAATAGGCAAGTGAAACCAGACAATAACTCAAACCACCAAAAGGATTTAGCCTGGACCAAGTGTTTAAACAGCAGTGGAGGAGGAAGCTCTACCCCTGAGGAAATACATGAACAATGGGATGTTGACCTCTCTAAGTTGTTTCTTGGCCTTAAGTTTGCTCACGGCGCCCATAGTCGGCTTTATCACGGTGTATATAAGGAAGAGTCTGTTGCAGTTAAAATGATTAGAGTACCAGATGATGATGATGAAAATGGAACCTTGGCTTCTAAATTAGAGAATCAGTTTACCAGAGAAGCCACCTTTTTATCTCACCTTTACCATCCAAATATTATAAAGTTAGTAGCAGCATGCAAAAAGCCACCGGTTTACTGTATCATCACAGAGTATCTATCGGAAGGTTCTTTGAGGTCATACTTGCATAAGTTGGAGCGCAAACCTATGTCTCTAGACAAGCTAATAGCTTTTGCTCTGGATATTGCTCGTGGAATGGAATATATACACTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTCCTTATTAACGAAGACTCTCACCTCAAAATTGCCGATTTTGGAATTGCTTGTGAGGAGGCAGTGTGTGATTTACTGGCTGATGACCCGGGAACCTATCGGTGGATGGCGCCTGAGATGATCAAACGTAAATCCTATGGGAAAAAGGTGGATGTCTACAGTTTCGGGCTTATATTATGGGAAATGTTGACTGGAACAATACCATATGAGGAAATGACTCCAATACAGGCTGCTTTTGCGGTAGTAAATAAGAATGCAAGGCCAGTTATTCCTTCAGACTGCCAACCTGCTATGCGAGCTTTGATTGAGCAATGTTGGTCCTCCGAACCCAATAAGAGGCCGGATTTCTGGCAGATTGTCAAGGTACTAGAGCAATTCGAATCCTCGCTTGCAGACAACGGCACCCTGACTCTGGTAGAAAACCCTCTTTCCCATGATCATAAGAAACGTCTTCGGCATTGGATTCTAAAGCTTAGTCCTGCCTATCCTGCGCATCCAAACAGTGGCCCGGTGCCTAAACCCAAATTCACATGA 1404 0.4345 MGENHNSWLRRTKFSHTVCHRLNPSTLAFIPLSNETEHNSGLKSRPSRSSSPLPEILLSDTFREARHDQKRFSTPGPRRNLSNKGNMGKLQCNELGENKVLRLKLHSNRPNRQVKPDNNSNHQKDLAWTKCLNSSGGGSSTPEEIHEQWDVDLSKLFLGLKFAHGAHSRLYHGVYKEESVAVKMIRVPDDDDENGTLASKLENQFTREATFLSHLYHPNIIKLVAACKKPPVYCIITEYLSEGSLRSYLHKLERKPMSLDKLIAFALDIARGMEYIHSQGVIHRDLKPENVLINEDSHLKIADFGIACEEAVCDLLADDPGTYRWMAPEMIKRKSYGKKVDVYSFGLILWEMLTGTIPYEEMTPIQAAFAVVNKNARPVIPSDCQPAMRALIEQCWSSEPNKRPDFWQIVKVLEQFESSLADNGTLTLVENPLSHDHKKRLRHWILKLSPAYPAHPNSGPVPKPKFT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60581g00014 467 SMART serkin_6 156 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60581g00014 467 FunFam serine/threonine-protein kinase HT1 242 434 - -
Stsc60581g00014 467 PRINTS Tyrosine kinase catalytic domain signature 340 362 IPR001245 GO:0004672|GO:0006468
Stsc60581g00014 467 PRINTS Tyrosine kinase catalytic domain signature 384 406 IPR001245 GO:0004672|GO:0006468
Stsc60581g00014 467 PRINTS Tyrosine kinase catalytic domain signature 237 250 IPR001245 GO:0004672|GO:0006468
Stsc60581g00014 467 PRINTS Tyrosine kinase catalytic domain signature 275 293 IPR001245 GO:0004672|GO:0006468
Stsc60581g00014 467 PRINTS Tyrosine kinase catalytic domain signature 321 331 IPR001245 GO:0004672|GO:0006468
Stsc60581g00014 467 FunFam Kinase suppressor of Ras 1 145 240 - -
Stsc60581g00014 467 Pfam Protein tyrosine and serine/threonine kinase 161 413 IPR001245 GO:0004672|GO:0006468
Stsc60581g00014 467 MobiDBLite consensus disorder prediction 75 89 - -
Stsc60581g00014 467 SUPERFAMILY Protein kinase-like (PK-like) 140 413 IPR011009 -
Stsc60581g00014 467 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 98 421 - -
Stsc60581g00014 467 Gene3D Phosphorylase Kinase; domain 1 144 241 - -
Stsc60581g00014 467 CDD STKc_MAP3K-like 163 413 - -
Stsc60581g00014 467 MobiDBLite consensus disorder prediction 64 90 - -
Stsc60581g00014 467 ProSiteProfiles Protein kinase domain profile. 156 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60581g00014 467 Gene3D Transferase(Phosphotransferase) domain 1 242 443 - -
Stsc60581g00014 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60581g00014 Stsc-Chr60581 46704 49252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60581g00014 1 467 MAP Kinase Kinase Kinase AT5G58950 51.613 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc60581g00014 PK_Tyr_Ser-Thr 1.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60581g00014 - - gmx:100500590 655.981