Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60581g00013 ATGGGTGAAAATCATAATTCTTGGTTAAGGAGGACAAAATTCTCTCACACTGTGTGCCACCGCTTAAATCCTTCGACACTGGCTTTTATTCCTCTCAGCAATGAGACAGAGCACAATTCGGGTCTCAAGTCAAGGCCTTCGAGATCTTCTTCACCCTTGCCCGAAATTTTGCTTTCTGACACCTTTAGAGAGGCACGACATGATCAAAAGAGGTTTTCAACACCAGGTCCTAGGAGGAATTTAAGCAATAAGGGAAACATGGGCAAGTTGCAATGCAATGAGCTTGGGGAAAATAAGGTTTTGAGGTTGAAATTGCATTCCAATAGACCGAATAGGCAAGTGAAACCAGACAATAACTCAAACCACCAAAAGGATTTAGCCTGGACCAAGTGTTTAAACAGCAGTGGAGGAGGAAGCTCTACCCCTGAGGAAATACATGAACAATGGGATGTTGACCTCTCTAAGTTGTTTCTTGGCCTTAAGTTTGCTCACGGCGCCCATAGTCGGCTTTATCACGGTGTATATAAGGAAGAGTCTGTTGCAGTTAAAATGATTAGAGTACCAGATGATGATGATGAAAATGGAACCTTGGCTTCTAAATTAGAGAATCAGTTTACCAGAGAAGCCACCTTTTTATCTCACCTTTACCATCCAAATATTATAAAGTTAGTAGCAGCATGCAAAAAGCCACCGGTTTACTGTATCATCACAGAGTATCTATCGGAAGGTTCTTTGAGGTCATACTTGCATAAGTTGGAGCGCAAACCTATGTCTCTAGACAAGCTAATAGCTTTTGCTCTGGATATTGCTCGTGGAATGGAATATATACACTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTCCTTATTAACGAAGACTCTCACCTCAAAATTGCCGATTTTGGAATTGCTTGTGAGGAGGCAGTGTGTGATTTACTGGCTGATGACCCGGGAACCTATCGGTGGATGGCGCCTGAGATGATCAAACGTAAATCCTATGGGAAAAAGGTGGATGTCTACAGTTTCGGGCTTATATTATGGGAAATGTTGACTGGAACAATACCATATGAGGAAATGACTCCAATACAGGCTGCTTTTGCGGTAGTAAATAAGGTATGTTCTCTGTAA 1137 0.4204 MGENHNSWLRRTKFSHTVCHRLNPSTLAFIPLSNETEHNSGLKSRPSRSSSPLPEILLSDTFREARHDQKRFSTPGPRRNLSNKGNMGKLQCNELGENKVLRLKLHSNRPNRQVKPDNNSNHQKDLAWTKCLNSSGGGSSTPEEIHEQWDVDLSKLFLGLKFAHGAHSRLYHGVYKEESVAVKMIRVPDDDDENGTLASKLENQFTREATFLSHLYHPNIIKLVAACKKPPVYCIITEYLSEGSLRSYLHKLERKPMSLDKLIAFALDIARGMEYIHSQGVIHRDLKPENVLINEDSHLKIADFGIACEEAVCDLLADDPGTYRWMAPEMIKRKSYGKKVDVYSFGLILWEMLTGTIPYEEMTPIQAAFAVVNKVCSL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60581g00013 378 PRINTS Tyrosine kinase catalytic domain signature 275 293 IPR001245 GO:0004672|GO:0006468
Stsc60581g00013 378 PRINTS Tyrosine kinase catalytic domain signature 321 331 IPR001245 GO:0004672|GO:0006468
Stsc60581g00013 378 PRINTS Tyrosine kinase catalytic domain signature 237 250 IPR001245 GO:0004672|GO:0006468
Stsc60581g00013 378 PRINTS Tyrosine kinase catalytic domain signature 340 362 IPR001245 GO:0004672|GO:0006468
Stsc60581g00013 378 MobiDBLite consensus disorder prediction 75 89 - -
Stsc60581g00013 378 Gene3D Phosphorylase Kinase; domain 1 144 241 - -
Stsc60581g00013 378 SUPERFAMILY Protein kinase-like (PK-like) 141 375 IPR011009 -
Stsc60581g00013 378 MobiDBLite consensus disorder prediction 64 90 - -
Stsc60581g00013 378 ProSiteProfiles Protein kinase domain profile. 156 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60581g00013 378 FunFam Kinase suppressor of Ras 1 145 240 - -
Stsc60581g00013 378 SMART serkin_6 156 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60581g00013 378 Gene3D Transferase(Phosphotransferase) domain 1 242 377 - -
Stsc60581g00013 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Stsc60581g00013 378 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 96 372 - -
Stsc60581g00013 378 Pfam Protein tyrosine and serine/threonine kinase 161 369 IPR001245 GO:0004672|GO:0006468
Stsc60581g00013 378 CDD STKc_MAP3K-like 163 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60581g00013 Stsc-Chr60581 46704 49796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60581g00013 1 374 MAP Kinase Kinase Kinase AT5G58950 51.878 9.76e-147 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc60581g00013 PK_Tyr_Ser-Thr 7.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60581g00013 - - gmx:100500590 518.85