Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60581g00011 ATGGTTGGAGCTTTCGAAGTCGGACCTGTACCATTCAACCCAGACGGATGGGGCCCTCCGGAATCCGCCGCTGCAGCCGCCGCCACCACCAACAGCAACCTCCCCCTCAACGTCCCGTTCGCTCCCTTCTCTCGCTCTGACAAGCTTGGCCGGATCGCTGACTGGACTCGCAACTTCAACAACCCTTCCCGCACTAAAAATCCTGCCGATTCGGTCTTCGACTTCTCCAACGATGATTCCTTCCCTGCCTCTGCCGATGACGACTCCTCCTTTCGCCTCGTTGACGGTAAGCCCCCTCCAAGGCCCAAATTCGGCCCAAAGTGGCGCTTCCAGCAGCAGCGCCAGCTCCCTCAGCGCCGCGACGAGGAGGTCGAGGCTCGAAAGCGCGAGGCCGAGAAGGAACGTGCTCGCCGCGACCGCCTCTACCATCTCAACCGCTCAAATGCCAACGCCAACCGCCGCGAAGCCGCCGTGTTCAAATCGTCCGTCGATATCCAACCGGAATGGAACATGCACGACCAGATCCCGTTCTCCACCTTCTCGAAGCTCTCGTTCTCCGTCCCCGACCCCGAAGATCTCCTCCTCTGCGGTGCTCTCGAGTACTACGACCGCACCTACGACCGCATCACGCCGAAGAACGAGCGCCGCCTTGAGCGATTCAAGAATCGTAACTTCTTCAAGGTCACCACCACTGATGATCCCGTTATTCGCAGGCTCGCCAACGAGGATAAGGCGACGGTTTTCGCAACCGATACTATCCTCTCCACGCTCATGTGCGCCCCTAGGTCGGTTTACTCTTGGGATATCGTTGTGCAGCGCGTTGGGAACAAGCTGTTCTTCGATAAGCGTGATGGATCACAGCTTGATTTGCTCTCTGTTCATGAAACCTCTCAGGAGCCTCTTCCCGAGGCTAAGGATGATATCAACTCTGCACATTCGTTGAGTGTTGAAGCTGCTTATATTAACCAGAATTTCTCTCAACAGGTTCTGGTTAGGGACGGTAATAAGGTGAGTTTCGATGAGCCTAATCCTTTTGCGAACGAGGGCGAGGAAGTTGCTTCTGTGGCATATAGGTATAGGAGGTGGAAGCTCGACAATGATATGTATCTTGTGGCGAGGTGTGAGGTGCATAGTGTTCTTGAGCTGAATAAGAACAAGAATTTCCTTACTTTGAATGCTTTGAATGAGTTTGATCCGAAGTATTCGGGTGTCGATTGGAGGCAGAAGTTGGAGACTCAGAGGGGAGCTGTGTTGGCCACTGAGCTCAAGAACAATGCTAATAAGTTGGCTAAATGGACTGCGCAGGCTTTGTTGGCCGGCGCCGATATGATGAAGCTGGGATATGTGTCTAGAATCCATCCCCGTGATCATTTCAATCATGTGATTTTGGCTGTGGTTGGATACAAGCCTAGGGACTTTGCAGCCCAGATCAATTTGAACACTTCTAATATGTGGGGAATTGTTAAGTCTATTGTGGACTTGTGCATGAAGCTCAATGAGGGGAAGTATGTTCTTGTGAAGGACCCGTCTAAGCCGCAGGTTAGGATCTATGAGGTCCCGCCGGATGCATTTGAGAATGACTACGTGGAGGAGCCACTTCCTGAGGAGGAACAAGTTCAACCTCCTGCAGAGGGTGCTGATGGTGTAGATACAACTGTTGCTGCGAATGAAGTTGAGGATAAGCAGATAGATGATCAAGCTTAG 1704 0.5264 MVGAFEVGPVPFNPDGWGPPESAAAAAATTNSNLPLNVPFAPFSRSDKLGRIADWTRNFNNPSRTKNPADSVFDFSNDDSFPASADDDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYHLNRSNANANRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFSVPDPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLVRDGNKVSFDEPNPFANEGEEVASVAYRYRRWKLDNDMYLVARCEVHSVLELNKNKNFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLAGADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFENDYVEEPLPEEEQVQPPAEGADGVDTTVAANEVEDKQIDDQA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60581g00011 567 Coils Coil 119 139 - -
Stsc60581g00011 567 MobiDBLite consensus disorder prediction 529 567 - -
Stsc60581g00011 567 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 530 IPR007783 GO:0003743|GO:0005737|GO:0005852
Stsc60581g00011 567 MobiDBLite consensus disorder prediction 114 135 - -
Stsc60581g00011 567 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 541 IPR007783 GO:0003743|GO:0005737|GO:0005852
Stsc60581g00011 567 PIRSF Transl_init_eIF3d 1 548 IPR007783 GO:0003743|GO:0005737|GO:0005852
Stsc60581g00011 567 MobiDBLite consensus disorder prediction 1 28 - -
Stsc60581g00011 567 MobiDBLite consensus disorder prediction 84 135 - -
Stsc60581g00011 567 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 518 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60581g00011 Stsc-Chr60581 39750 42610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60581g00011 4 565 Eukaryotic Initiation Factors Gene Family AT4G20980 77.055 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60581g00011 K03251 - gmx:100799613 969.148