Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60579g00010 ATGCAACAATTCAATAAAGATCCTAAGACTGTTCTTGATAAACTTCATGTCAAATATGGTCCAATCTTTACTTTTCAAATGGGTTCTCATACTGACATTTACATTGCCAACCGATTCCTTGCTCACCAAGCATTGATCCAAAATGGCAGCACCTTCGCCAACCGCCCTGTTGCTGTTCCTACCAAGAAAATCATCAGCAGCAATCAGCATGACATCCTTTTTAGCTTCTACAGTCCTGTATGGCGCGCCCTCCGGCGAAACCTCACCTCAAAGATCCTTCACCCTTCACAGGTCAAGTCTTATGCAAATGCGCGCAAATGGGTGTTAGATATGCTTTTTGATCGGTTAAAATCTGAATTGGGGGCAAGCAACCCCATAAGGGTCATTGATCATTTTCAATATAGCATGTTTTGCTTGCTCATTTTTATGTGTTTTGGTGACAAGCTTGATGAGAAGCAAATAAGGGAAATTGAGGATAGTTTACGTGGCATGCTCTTGAGCTTTACTAGGTACAATGTCTTGAATTTTTGGCCACGAATCACAAGGATATTGTTTTGGAAGAGATGGAAGGAATTCTTACAGCTAAGGAGAGACCTAGAAGCCGTGTTGGTTCCTTATATCGATGCTCGAAAGAAAATCAAGCAAGACAGACTTAGCAAGGATGGTGAAGAGGACAACACAAATGAGTTTGTCTTGTGCTATGTGGATACTTTGTTGGATTTGCGACTGGTGGACGATGATGAAGGGAGCAAGCTTGATTATGGTAATATCTGCACCTTATGCTCAGAGTTTCTAAACGCCGGAACAGATACTACTTCGACAGCATTGGAATGGATCATGGCAAATTTGGTGAAGTACCCTCAAATCCAAGAAAGGCTTGTAGAGGAAATCAGAGAGGTCATGGTTGATGGAGAGGGGGATGTGAAGGAGGAAGATTTGCAAAGATTGCCATATCTAAAAGCTGATGTAGTTCTGGATGGTTATTTGGTTCCTACCACTGCCTCTGTAAATTTCTTTGTGGCTGAGATAGGAAGGGACCCTACAGCTTGGGATGATCCTATGGCCTTCAAGCCAGAGAGATTCATGGACAATGGAAGAACAACTTTTGATATAATGGGAAGTAAAGAGATAAAGATGATGCCATTTGGGGCAGGGAGGAGAATGTGCCCTGGATATGGTTTAGCAATTCTCCACTTGGAGTATTTTGTGGCCAATCTTGTTTGGAATTTTGAGTGGAAGGCTATGAGTGGGGATGAAATTGATATGTCAGAGAAGCTGCTATTCACAACTGTGATGAAAAATCCCTTAAAGGTTCATATATTTCCTAGGCAATAA 1335 0.4187 MQQFNKDPKTVLDKLHVKYGPIFTFQMGSHTDIYIANRFLAHQALIQNGSTFANRPVAVPTKKIISSNQHDILFSFYSPVWRALRRNLTSKILHPSQVKSYANARKWVLDMLFDRLKSELGASNPIRVIDHFQYSMFCLLIFMCFGDKLDEKQIREIEDSLRGMLLSFTRYNVLNFWPRITRILFWKRWKEFLQLRRDLEAVLVPYIDARKKIKQDRLSKDGEEDNTNEFVLCYVDTLLDLRLVDDDEGSKLDYGNICTLCSEFLNAGTDTTSTALEWIMANLVKYPQIQERLVEEIREVMVDGEGDVKEEDLQRLPYLKADVVLDGYLVPTTASVNFFVAEIGRDPTAWDDPMAFKPERFMDNGRTTFDIMGSKEIKMMPFGAGRRMCPGYGLAILHLEYFVANLVWNFEWKAMSGDEIDMSEKLLFTTVMKNPLKVHIFPRQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60579g00010 444 CDD CYP77_89 18 437 - -
Stsc60579g00010 444 Gene3D Cytochrome P450 1 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 Pfam Cytochrome P450 320 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 Pfam Cytochrome P450 3 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 435 - -
Stsc60579g00010 444 PRINTS P450 superfamily signature 380 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 PRINTS P450 superfamily signature 267 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 382 391 IPR017972 GO:0005506|GO:0016705
Stsc60579g00010 444 PRINTS E-class P450 group I signature 379 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 PRINTS E-class P450 group I signature 135 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 PRINTS E-class P450 group I signature 389 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 PRINTS E-class P450 group I signature 339 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 PRINTS E-class P450 group I signature 16 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60579g00010 444 FunFam Cytochrome P450 family protein 1 444 - -
Stsc60579g00010 444 SUPERFAMILY Cytochrome P450 5 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60579g00010 Stsc-Chr60579 35017 36431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60579g00010 12 444 Cytochrome P450 AT1G64950 54.386 1.27e-174 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60579g00010 K24184 - gmx:100816275 676.781