Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60579g00001 ATGGGTTCTCAGGATGGGATATCTGCATTGTCACCTGAGATTTTGTTGAAATACATGGATGAATTTCCATCATATGATAGGAGTCAAACTGCTGGTCAAACTGGAAAGAGCATTGCCCAGGGTTTGTCAGATTTGGTGACAGAGCAAAAGCTATGGAGAACTGCAGTTCTTTGCCTATGTGAAGCTGGAAAATATAGCAGAGTGCGACTGCTGGATTTATTTTGTGAAGTGCTCAATCCAGATTTATACCCGCATAGGGATTCTGTTTGTTACATCAGGAATGAAAAGGATCAGGGGTTGTCTTCAACAAATGGCCACAGTCAACAATACTCTTCCGTTCAAAGTGGTGGTTTGATTCGCCAGATAGTTCGCAAACTGAGGGATCTCCCTCCTGGAACACTTAGTCAATTGATTAAGAGTTGGGAAAAACTTACCACAGATATTTCCGAGATTCATGATAAATTGAAAATGTTTCAATCTTCAGTAAGATGTGAGGAAAGAAGGAGTCCACGCAAGAGCTCCAAGAGATACGGATCCAAGGTTCCATTAGACATTGACAATGAATCGAGAATGTTAAATTCACAAGCTGTTGCATTTATAGATTGCTTGGTTAGAAATTATATGAGGCCAATTGAATGCATGCCTTTCCATGAAATTTCCTGCTTCAAGAATGTTGAGAAGCTTCAAAAGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGCTGATCTGTTGGATTCACATAGGATTTTAAGGTGCAGTTGCTGTAACAAAACTGGCAATTCTCTATTACCATCAAGACAGGATTCCTCAATTATGTATTCCTTGGCTCAAGAGCATGGAGATCTTATCAATCTTCACGATTGGTTCCAGTCTTTTAGAACAATTATTCACCAAACGAATAAACGGAAACCAAAGTCAAAGCAGTCACCCCAGCCAAAGAAGAGAAAAGATACAGCTGGATCTGGAGAACCAAATGAAGCATCAATCCAAGCACTCTTTTGCAGAGCAGTTACAGAAATGCAGATCACCGGGCTGCTTAGAATGCCCAGCAAGAGGCGCCCAGATTTTGTACAAAGAGTAGCTTTTGGACTTTGA 1098 0.4053 MGSQDGISALSPEILLKYMDEFPSYDRSQTAGQTGKSIAQGLSDLVTEQKLWRTAVLCLCEAGKYSRVRLLDLFCEVLNPDLYPHRDSVCYIRNEKDQGLSSTNGHSQQYSSVQSGGLIRQIVRKLRDLPPGTLSQLIKSWEKLTTDISEIHDKLKMFQSSVRCEERRSPRKSSKRYGSKVPLDIDNESRMLNSQAVAFIDCLVRNYMRPIECMPFHEISCFKNVEKLQKVLIGDPRRRIQADLLDSHRILRCSCCNKTGNSLLPSRQDSSIMYSLAQEHGDLINLHDWFQSFRTIIHQTNKRKPKSKQSPQPKKRKDTAGSGEPNEASIQALFCRAVTEMQITGLLRMPSKRRPDFVQRVAFGL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60579g00001 365 Pfam Origin recognition complex winged helix C-terminal 237 363 IPR040855 -
Stsc60579g00001 365 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 11 364 IPR020795 GO:0003677|GO:0005664|GO:0006260
Stsc60579g00001 365 CDD Orc3 207 363 - -
Stsc60579g00001 365 MobiDBLite consensus disorder prediction 300 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60579g00001 Stsc-Chr60579 565 5803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60579g00001 4 297 Core DNA Replication Machinery Family AT5G16690 41.748 1.15e-75 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60579g00001 K02605 - gmx:100780646 488.804