Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60578g00003 ATGCTGGATTTAAGAGGAACGTCCATCGAGACGTTAGACAAGTCCATTGGGAGTCTCAGCAAACTTGACAAGTTCTATGTCTGCGAGTCTCTAAAACATGTTCCAAAGGATTTACCTTCGATGACATGTCTTAGGGACCTGAGTCTTCATAATTGCACTCAACTTGACAATTCAAATTTGCAGAACTTACTTGATGCTTCACATTCTGTGCAAAACCTGATTTTGAATGGTTGTTTTAACTTGTCTGAAATCCCTCACAATATCAAGCATCTTTCTTGCCTTGAGCATTTGTCAATAAGGGATTGCATTCGCCTTCGCCATGTTCCTACCCTTCCACCATCTGTTGGACAGTTAGATGCCGTCAATTGCAGTTCCCTTGAGACATTAGTGTTGCCTTCAACCTCTCCAAGACAAATTCGGGGGAAGAACATAAGCATTTCATTTGAAAATTGTGTGAAATTGAATGAACATTCTAGAATTAGTATAATGGAACATGCTAGTGTCATGATGAAGCTACTTGCATATGCGAATGTTGATATTCCGGAAACAATGCGTACTAGTGGTACTGTTTGTTTGCCTGGTAGCAAGGTGCCAGCAACATTCAAGAACAGGACTAGACATGCTTACACTGCTGAGTATGAGTATCATCAAATAGTATGTCGATGGTGCTTGGAAGACAATGATAACAGGGTTGGATACACGAGAAGGTGGTATTACAAAGATATCGCGGAGTTGAATTCGGATCATGTTTATCTATGGTATGAAGCATCATGTGACAAGATAATTGAGGCAGCAAAAGAAGAAAGCAAGTATAAGTGCATCATTGATAACATTAAAGTTTCATTTGAGTTCTATGTTGAGACATATAAGCTTAGTGAGCCTAAACAGATTGGGTTAATTGGTATAAAAGAGTGCGGAGTGTGTCCAATATATGCCTCAGAGTGTTATGATTCTAGAAACAAAATAGAATTGGATCGCATCACAGTGGCAATTGAAAGCTTTGAAGAAATGATAGATGAGGAAGAGAAACCTCATCAGATGAAGAATCAAGAAAAAGATTACTGTGATTGCTTAATAGGTATGAACAAATCTTGA 1095 0.3863 MLDLRGTSIETLDKSIGSLSKLDKFYVCESLKHVPKDLPSMTCLRDLSLHNCTQLDNSNLQNLLDASHSVQNLILNGCFNLSEIPHNIKHLSCLEHLSIRDCIRLRHVPTLPPSVGQLDAVNCSSLETLVLPSTSPRQIRGKNISISFENCVKLNEHSRISIMEHASVMMKLLAYANVDIPETMRTSGTVCLPGSKVPATFKNRTRHAYTAEYEYHQIVCRWCLEDNDNRVGYTRRWYYKDIAELNSDHVYLWYEASCDKIIEAAKEESKYKCIIDNIKVSFEFYVETYKLSEPKQIGLIGIKECGVCPIYASECYDSRNKIELDRITVAIESFEEMIDEEEKPHQMKNQEKDYCDCLIGMNKS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60578g00003 364 SUPERFAMILY L domain-like 2 143 - -
Stsc60578g00003 364 Gene3D Ribonuclease Inhibitor 1 124 IPR032675 -
Stsc60578g00003 364 PANTHER LEUCINE-RICH REPEAT-CONTAINING 2 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60578g00003 Stsc-Chr60578 6235 7400 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60578g00003 36 193 WRKY Transcription Factor Family AT4G12020 27.215 8.73e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60578g00003 - - aprc:113851031 437.958