Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60578g00001 ATGTTTCCATCACAGGATCTTAGCAATCTAGAAGTAATTGACCTGAGTGAATGCAGAAAGTTGGAGAACCTTCCAGATTTGACCAATGCAAAAAGGCTTAGATGGGTGAATCTGTCCGGTTGTGAGAAGTTGCGTTACCTTCATCCATCGGTTCTATCTGCTGGTAAACTTGCTACTTTGCTACTGGACAGGTGCACAAATCTGGTTCAGGTTAAAAGTGAGAAGCGCCTAGAATCTCTAAAGAAGATCAGTGTGAATGGCTGCTCAAGTCTCAGGGAATTCGAGGTGCGGTCGCATTTAATTGAGAAATTGGATCTAAGCAAGACTGCAATTAGAACATTACACACATCCATTGGGGACATAAAGAATCTGAAGTCCCTCAATCTAGAAGGTTTAAGACTTGAGAGTCTTGTGAAGGAGTTGTCCAAATTGAAATCCCTAGAATATCTTAATCTTTCTCGCAGTGGACTAAAGTTTGAGAAAGACCAGCTACGTGTCCTGTTTGATGGCTTAAAATCATTAGCGAAACTACATCTGAAGCACTGTATTAATTTGTTTGAGCTCCCTGACAACATGGACGCCTTATCTCAATTAAATGAATTAAGGCTTGATGGGAGCAGCATAACAGCTCTGCCAGCAAGCATCAAGAACCTTACAAGGCTGGAAATCTTGTCGTTGGAGAACTGCAATCAGCTCGTGAGATTGCCGGAGCTTCCAGCGTCCATCAAGGAGTTAAATATCAATAACTGCGCTTCATTGGAGAGTCTATCAAGTTTAAGGAGTTCTGCGAGCAAGATGATAGGAAAGATGAAACACATTTTGGCCCAGGACTGCTTGAAACTTGGTAACAAGGATTCAATTGTAGAAGACCTGCTCTTAACAATGGCGAGTGCTGCATTTCACAATGTGCTAGTAAGATCTTATGACAACAGACTCCACAGTTACAATTACAACAGGGTTGAGGCTTGTCTATCAGGGAAGAGTGTCCCAAGGCAGTTCAAAAATCGAACAATAGAGTCGTCCTCCATTACTATAGTTAGAACCCCCAACCCTGCCGCGGTGCTGGGATTTCTACTGTCAGCGGTTCTCTCTCCATCGCCCGAAGCGAAACAAGGTATGGAAACCTCTCACATTTATTGTAGATGTTACTCGGCAGATGGCACACCCATAGGTGACTGCACAAGTTGGTCTTCAGCGATTGACAACTTGCATTCGGATAATTTGTTTGTTTGGTATGACCCCTACTTCTGCGATTCCGTTATCAAGACTCACGAGAAACAGGTGTCTTTCGAGTTTTCTAGTGACGATGGATTGGGAGTTATAAAAGACTGTGGTGTCCGCGTAATAGGCCCCTCTGAGTTTCATAGGGTTTTATGGGGAATAACTTTGGAGTACGATCAAAAAGTGGAATTGGGAGTGAAATTAGGGTTGGCGTTAGACATACAACGCCAGGCGGACTCTGAGTCTGAGCTGGATTTAACTAATTTGCTGTTTGCATTAGAGTATCGGTGGAAGTTAAAACCGCAAATGGAATCCGAGCTTGAATCGCGACGCAAAGAAATGGCGGAGATAATCACGAGAGAGATTGATAAACTTCGTCTGTCCGTCTATCCGCCGCGTCCTGCCGTTGACAGCATCACGCGGGGCTTGATAGATATCCTGCCAAACCTGGACAAATGA 1680 0.4399 MFPSQDLSNLEVIDLSECRKLENLPDLTNAKRLRWVNLSGCEKLRYLHPSVLSAGKLATLLLDRCTNLVQVKSEKRLESLKKISVNGCSSLREFEVRSHLIEKLDLSKTAIRTLHTSIGDIKNLKSLNLEGLRLESLVKELSKLKSLEYLNLSRSGLKFEKDQLRVLFDGLKSLAKLHLKHCINLFELPDNMDALSQLNELRLDGSSITALPASIKNLTRLEILSLENCNQLVRLPELPASIKELNINNCASLESLSSLRSSASKMIGKMKHILAQDCLKLGNKDSIVEDLLLTMASAAFHNVLVRSYDNRLHSYNYNRVEACLSGKSVPRQFKNRTIESSSITIVRTPNPAAVLGFLLSAVLSPSPEAKQGMETSHIYCRCYSADGTPIGDCTSWSSAIDNLHSDNLFVWYDPYFCDSVIKTHEKQVSFEFSSDDGLGVIKDCGVRVIGPSEFHRVLWGITLEYDQKVELGVKLGLALDIQRQADSESELDLTNLLFALEYRWKLKPQMESELESRRKEMAEIITREIDKLRLSVYPPRPAVDSITRGLIDILPNLDK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60578g00001 559 Gene3D Ribonuclease Inhibitor 2 98 IPR032675 -
Stsc60578g00001 559 Gene3D Ribonuclease Inhibitor 99 292 IPR032675 -
Stsc60578g00001 559 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 166 279 - -
Stsc60578g00001 559 SUPERFAMILY L domain-like 7 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60578g00001 Stsc-Chr60578 1717 4128 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60578g00001 101 254 WRKY Transcription Factor Family AT4G12020 32.278 2.96e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60578g00001 - - aip:107614919 641.343