Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60577g00010 ATGTTCCACCTAGGATTCTTTACTCCTTCTAACTCATCAACCTTCTCATACCTTGGAATTTGGTACATGTCCAAATCCTCTGTGGTCTGGGTTGCCAACAGAAACCAACCTATAAAGGATTCCTCTTCAGGGAATCTCCAAATATCTGAGGATGGAAACCTTGTTGTGATGAACCAACAGAAGCAGATTCTTTGGTCAACAAACATCACCAATATTACATCCAACACAACAGCACAGCTCCAGAACACAGGAAACCTTGTGTTGCAAGAAAACACCACAGGAAGGACTCTTTGGCAGAGTTTCCAGCACCCTTCAAATACTTTCTTGCCGAAAATGGAGCTTAGCACCAATGAGATTACTGGCCAGAGAGTAAAACTCACCTCATGGAGAACTCCTAGTGATCCATCCATGGGAGACTTCTCTATGAGTCTTGAAAGACTTAACATCCCTCAAGTGTTCATATGGAAAGGAACTCAACCTTATTGCCGAAGCGGTCCATGGAATGGTCAAGTTTTTATTGGGATACCTACAATGAACACGGACTATCTTGACGGTTTCTACTTAGATGGTGAAGGTCAAAACAATGGCACTTACTACCTCTCATACAACTATGCGAACACGACGATGATGTATGTGTTGAGTTCTGATGGAAACTTCCCTGAAACCTATTGGGATTATGCAAAGAGAGAATGGATTGTGGACTGGCTTGCTATAAGCTCAGAGTGTGATGTTTATGGAAAGTGTGGTCCCTTTGGAAGCTGTGATCCTACAAATTCACCTATATGCAGCTGTTTGAGAGGCTTTGAGCCAAGGAATGCTCAAGAGTGGAATAAAGGAAACTGGAGCAGCGGTTGCGTGAGGAAGAAGCCTCTGCAGTGTGATGAGAGAGTTAGAAATAATAATAGCAGTGGTGGAGATGGATTTGTAAGGCTGCAAAATGTTAAGGTTCCAGATTTTTCCCAGTGGATGTCCTCTATTGCTTATGATTGCAGAACTGAGTGCTTGGAAAATTGCTCTTGCATTGCATATGCTTATGATTCTGGCGTTGGCTGCATGTTATGGACGGGAAACTTGATTGACATACAGAAGTTCTCAATGGGAGGAATCGATCTTTACATTCGACTTCCCTCTTCTGAACTTGAGAAGAAAAATCTCCCACTGATCATAGCTCTTTCAGTCATAATAGCATTGGCTCTTCTTGTGGCTTGTGCATATATCTTGTGGAAATGGACTATGAGAAGAGTGAAAGCATTTCAAACTCATGTTGATGATATAAGTCAAGTTAAACTTCCGGAGAATTCACTATTTGAGCTTGAAAAGCTTGCTACTGCAACAAACAACTTTCACTCAAATAATAAGCTAGGACAAGGTGGTTTTGGATCTGTATATAAGGGAAGATTGGAAGATGGACAGGAGATAGCAGTTAAAAGACTTTCAAAAACATCTGGACAAGGTGTAGAAGAATTTATGAATGAAGTTATGGTAATGTCAAAGCTTCAACACCGGAATCTGGTCAGACTTCTTGGATGTTGCATAGAAAGAGATGAAAAGATTTTGGTCTATGAATACCTGCCAAATAGAAGCTTGGATGCACATATATTTGATCCACCTAAACAAAAGGCATTAAATTGGGAAAAACGTTTTAACATTCTTGAAGGAATCGCTCGAGGTCTACTTTACCTTCATAGAGATTCTAGACTAAAGATTATACACAGAGATTTGAAATTAAGTAATATACTGTTAGATGACGAGTTAAACCCGAAAATATCAGATTTTGGAATGGCAAAGATTTTTGAGAATACTGAAAATGAGGCCAATACTAGAAGGATTGTTGGAACATTTGGTTATATATCACCAGAATATGCTCTACAAGGACTGTTTTCAGAAAAATCTGATGTATTTAGCTTTGGTGTTTTACTACTAGAGATTATCAGTGGCAGAAAAAACAGCAGCTTTCATGAAAATGCTGAATCTTTGAGCCTTTTGGGGTTTGCATGGAAATTGTGGGAAAATGACAACATAGGATCACTAATAGATTCAGAAATATCAGATTCAAGCAATAAAGAAGATATAATGAGGTGCATACATATTGGTCTTTTATGTGTACAAGAACTTGCAAGGGATAGGCCTACTATGACTGCAGTAATTTCAATGCTTAATAGTGAGACTGTTAATCTTCCTCCTCCCAAACAGCCAGCATTCATTCAAATACAGACTATGTTGGATGTAGAGTCTTCTCTAAGAAATGATGGAGCATGTTCCATCAATTACATGAGTCTGACAAACATCCAAGGAAGATAA 2301 0.3916 MFHLGFFTPSNSSTFSYLGIWYMSKSSVVWVANRNQPIKDSSSGNLQISEDGNLVVMNQQKQILWSTNITNITSNTTAQLQNTGNLVLQENTTGRTLWQSFQHPSNTFLPKMELSTNEITGQRVKLTSWRTPSDPSMGDFSMSLERLNIPQVFIWKGTQPYCRSGPWNGQVFIGIPTMNTDYLDGFYLDGEGQNNGTYYLSYNYANTTMMYVLSSDGNFPETYWDYAKREWIVDWLAISSECDVYGKCGPFGSCDPTNSPICSCLRGFEPRNAQEWNKGNWSSGCVRKKPLQCDERVRNNNSSGGDGFVRLQNVKVPDFSQWMSSIAYDCRTECLENCSCIAYAYDSGVGCMLWTGNLIDIQKFSMGGIDLYIRLPSSELEKKNLPLIIALSVIIALALLVACAYILWKWTMRRVKAFQTHVDDISQVKLPENSLFELEKLATATNNFHSNNKLGQGGFGSVYKGRLEDGQEIAVKRLSKTSGQGVEEFMNEVMVMSKLQHRNLVRLLGCCIERDEKILVYEYLPNRSLDAHIFDPPKQKALNWEKRFNILEGIARGLLYLHRDSRLKIIHRDLKLSNILLDDELNPKISDFGMAKIFENTENEANTRRIVGTFGYISPEYALQGLFSEKSDVFSFGVLLLEIISGRKNSSFHENAESLSLLGFAWKLWENDNIGSLIDSEISDSSNKEDIMRCIHIGLLCVQELARDRPTMTAVISMLNSETVNLPPPKQPAFIQIQTMLDVESSLRNDGACSINYMSLTNIQGR 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60577g00010 766 Pfam Domain of unknown function (DUF3403) 721 766 IPR021820 GO:0004674
Stsc60577g00010 766 Pfam S-locus glycoprotein domain 163 271 IPR000858 GO:0048544
Stsc60577g00010 766 CDD B_lectin 2 104 IPR001480 -
Stsc60577g00010 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 569 581 IPR008271 GO:0004672|GO:0006468
Stsc60577g00010 766 Pfam D-mannose binding lectin 28 130 IPR001480 -
Stsc60577g00010 766 SUPERFAMILY Protein kinase-like (PK-like) 435 746 IPR011009 -
Stsc60577g00010 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 524 727 - -
Stsc60577g00010 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 412 523 - -
Stsc60577g00010 766 Gene3D Transferase(Phosphotransferase) domain 1 524 726 - -
Stsc60577g00010 766 ProSiteProfiles Protein kinase domain profile. 448 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60577g00010 766 ProSiteProfiles PAN/Apple domain profile. 293 376 IPR003609 -
Stsc60577g00010 766 SMART serkin_6 448 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60577g00010 766 Pfam Protein tyrosine and serine/threonine kinase 450 719 IPR001245 GO:0004672|GO:0006468
Stsc60577g00010 766 Pfam PAN-like domain 303 361 IPR003609 -
Stsc60577g00010 766 CDD EGF_CA 241 272 - -
Stsc60577g00010 766 Gene3D - 1 102 IPR036426 -
Stsc60577g00010 766 PIRSF SRK 1 766 IPR024171 GO:0004674
Stsc60577g00010 766 CDD STKc_IRAK 454 720 - -
Stsc60577g00010 766 Gene3D Phosphorylase Kinase; domain 1 410 523 - -
Stsc60577g00010 766 SMART blect_4 1 104 IPR001480 -
Stsc60577g00010 766 ProSiteProfiles EGF-like domain profile. 238 274 IPR000742 -
Stsc60577g00010 766 SMART ntp_6 303 375 IPR003609 -
Stsc60577g00010 766 ProSitePatterns Protein kinases ATP-binding region signature. 454 476 IPR017441 GO:0005524
Stsc60577g00010 766 ProSiteProfiles Bulb-type lectin domain profile. 1 101 IPR001480 -
Stsc60577g00010 766 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 1 709 - -
Stsc60577g00010 766 CDD PAN_AP_plant 290 376 - -
Stsc60577g00010 766 SUPERFAMILY alpha-D-mannose-specific plant lectins 18 169 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60577g00010 Stsc-Chr60577 27970 30784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60577g00010 375 734 Receptor kinase-like Gene Family AT4G23230 53.315 3.12e-125 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc60577g00010 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60577g00010 - - ahf:112714694 1090.49