Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60577g00007 ATGTCACCAGAATACGTCATACAAGGAATATTTTCAGAGAAGTCTGATGTATTTAGTTTTGGTGTTTTGTTGTTGGAGATTGTTAGTAAAAGAAAAAATGCCAGCTTTTATGAAGATGCTGAGTCTTTGAGCCTTTTAGGATTTACGTGGAATTTATGGAATGCCGATAACACTGCATCTCTAATAGATCCAGAAATATCAAGTTCATGCAAGAAAGAAGATATTATAAGGTGCATACATATTGGGCTTCTATGTGTTCAAGAGCTTGCAAGAGATAGACCTACAATGACTTCAGTAGTTTCAATGCTTAGCAGTGAGACAGTGAATCTTCCTCCTCCAAAACAGCCAGCATTCATTCTAAGGCAGACTATTATTGATATAGAGTCTTCTCTTACAAATGATGGATTAGGCTCCATCAACAATGTCAGCATAACAAATATCCAAGGAAGATGA 453 0.362 MSPEYVIQGIFSEKSDVFSFGVLLLEIVSKRKNASFYEDAESLSLLGFTWNLWNADNTASLIDPEISSSCKKEDIIRCIHIGLLCVQELARDRPTMTSVVSMLSSETVNLPPPKQPAFILRQTIIDIESSLTNDGLGSINNVSITNIQGR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60577g00007 150 SUPERFAMILY Protein kinase-like (PK-like) 1 126 IPR011009 -
Stsc60577g00007 150 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Stsc60577g00007 150 Pfam Domain of unknown function (DUF3403) 105 150 IPR021820 GO:0004674
Stsc60577g00007 150 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Stsc60577g00007 150 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60577g00007 Stsc-Chr60577 19839 20378 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60577g00007 1 150 Receptor kinase-like Gene Family AT4G23150 45.806 1.72e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc60577g00007 PK_Tyr_Ser-Thr 1.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60577g00007 - - ahf:112714694 274.633