Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60577g00004 ATGTCACCGGAATATGCTATGCAAGGACTATTTTCAGAGAAGTCTGATGTATTCAGTTTTGGGGTTTTACTACTAGAGATTGTCAGCAGGAGAAAGAATACTAAATTTTATGAGGATGCAGAATCTCTGAGTCTTTTAGGATTTGCATGGAAATTGTGGAATGCTGATAACATTCCACCTCTGATAGATCCAGAGATATCAAATCCAAGCTGCAATGAAGAAATAATGAGGTGCATACACATTGGTCTTTTGTGTGTACAAGAACTTGCAAGAGATAGACCAACAATGACTGCAGTGGTTTCAATGCTTAATAGTGAGACTGCTAATCTTCCTCCTCCCAATCAGCCAGGATTTGTTCAGAGGCAGACTCTTCTGGATGGAGAGTCTTCTAATCTGACAAGTGATGGAGTGTGCTCCATCAATAATGTGAGCCTAACATATCTCCAAGGAAGATAA 456 0.3969 MSPEYAMQGLFSEKSDVFSFGVLLLEIVSRRKNTKFYEDAESLSLLGFAWKLWNADNIPPLIDPEISNPSCNEEIMRCIHIGLLCVQELARDRPTMTAVVSMLNSETANLPPPNQPGFVQRQTLLDGESSNLTSDGVCSINNVSLTYLQGR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60577g00004 151 Pfam Domain of unknown function (DUF3403) 105 151 IPR021820 GO:0004674
Stsc60577g00004 151 SUPERFAMILY Protein kinase-like (PK-like) 1 121 IPR011009 -
Stsc60577g00004 151 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 151 - -
Stsc60577g00004 151 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Stsc60577g00004 151 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60577g00004 Stsc-Chr60577 12582 13139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60577g00004 1 151 Receptor kinase-like Gene Family AT4G23140 49.032 5.14e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc60577g00004 PK_Tyr_Ser-Thr 1.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60577g00004 - - adu:107468469 271.166