Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60576g00017 ATGGGAAATATTGGTAATGTTATAAATGGGCTTAAGCCTGCATTTGGGATGATAATTGTTCAAGTTGCTTATGCTGGTCTTAGCATATTATACAAATTGGTTGTAGAAGATGGTATGAGTATGAGTGTTCTCATTGCCTATAGAACCCTAATTGCCACATCTTTTGTTGTTCCTCTTGCATTCTTCATGGAAAGGAAGAGCAAGCCAAAAATTACACCAGAAGTACTACTTCAATCATTCTTTTGTGGATTATTTGGGGTAACTTTACAACAAAATCTGTATGTGGGAGCAGTGGCTTTTGCATCAGCAACATATGCCTCAGCCATGACCAACCTTATTCCTGGTGTTACCTTCATCCTAGCCCTCTGTTTTGGATTAGAAAGGTTGAAGATTAGAACATTAACAGGGAAGGCTAAGGTTGTTGGCACTTTAATGGGAATTGGTGGAGTCATGATCATCACATTCTATAAGACCAGAGAGATTCACATTTGGCCAACACATCATCTCAATTTCAAGAAGAACAATGACCAATCACACATTTCTCCTACTAATCTATTTTTGGGTTCTGCTTTTGGTTTTGGAAATTGTTTGTGCTATTCAATGTGGTTGATCATCCAGGCTAGGATGAGTGAAAAATTTCCTTGGCAATATTCAAGTGCAGCATTGGTGTCAGGGATGGCATGTATTCAAGTAATTATATTTGCCCTTTGCATGGAAAGAAATTGGAATCAATGGAGGCTTGGTTGGAACATCAAACTCCTCGCTGTAGTTTATACGGGAATAGTGCCATCTGGAATAGCTTTGGTTCTGATTTCATGGTGTGTGAGATTAAGAGGTCCACTTTTTGCTTCAATTTTCAACCCTCTTTCTCTTGTCATAGTTACCATTGCAGCCTCTTTAATTTTGGATGAAAGATTCTTTGTGGGAAGGTATAAATACAGCTTAGGAGAAGTCTCCAATGAACTAAATTCACGGTGA 978 0.3845 MGNIGNVINGLKPAFGMIIVQVAYAGLSILYKLVVEDGMSMSVLIAYRTLIATSFVVPLAFFMERKSKPKITPEVLLQSFFCGLFGVTLQQNLYVGAVAFASATYASAMTNLIPGVTFILALCFGLERLKIRTLTGKAKVVGTLMGIGGVMIITFYKTREIHIWPTHHLNFKKNNDQSHISPTNLFLGSAFGFGNCLCYSMWLIIQARMSEKFPWQYSSAALVSGMACIQVIIFALCMERNWNQWRLGWNIKLLAVVYTGIVPSGIALVLISWCVRLRGPLFASIFNPLSLVIVTIAASLILDERFFVGRYKYSLGEVSNELNSR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60576g00017 325 Pfam EamA-like transporter family 188 307 IPR000620 GO:0016020
Stsc60576g00017 325 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Stsc60576g00017 325 PANTHER WAT1-RELATED PROTEIN 13 308 IPR030184 GO:0016020|GO:0022857
Stsc60576g00017 325 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 158 - -
Stsc60576g00017 325 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60576g00017 Stsc-Chr60576 73533 75994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60576g00017 11 309 Nodulin-like Gene Family AT1G25270 38.487 5.55e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60576g00017 - - aprc:113856022 399.438