Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60576g00012 ATGATTCGAAATGGTTGCGTTGCATCCCCACAAGTGTGTGTTCCTTTGAATTCGAGGCCATGGAAAGGTGTCATGCCCTGTAGCTCTTTCTTATGCTGTACTTCTCAGTTTCCTGCTAAGGTTGCTGTTTCCAACATTCGGAGCTCTTCGTCTTTTGGACATAGTTTTGAGTGTAAATCCTCGTCGCCAAGAGGAATGACATTCTCAAACATGTCTGTTGCGTCGAGCCTCCTTTCAAGCAGGGTTCAAAATCCTCTATTTCACACAATCCCTGTGTTACCGAAGCGGTGCGGGTCTACTACGACCGTTCGGGCTTCAAAGGATGTCCCAACTAGCTGGCGTTATCCGCAGATGACCAAGAAACCAAGATGGTGGTGGAGGTCACTAGCGTGCCTCCCTTACCTCATGCCTCTCCACGAGACATGGATGTACGCCGAGACAGCATACAATCTTCACCCGTTTCTGGAATACTTTGAGTTCATGACATACCCTTTTTTGGAGGCTATCGGGATGCTGCCTAGCTGGTTTCTCATGGCATATTTCTTCATCGCCTACCTCGGAATTGTGAGGAGAAAAGAATGGCCTCACTTCTTCAGATTTCATGTTGTAATGGGAATGTTGTTGGAGATTGCACTGCAGGTTATAGGAACTGTGAGTCGCTGGATGCCACTATCGGTCTACTGGGGTAAAATTGGAATGCATTTCTGGACTGGCGTATCTTTCGCTTATCTCTTCACTGTCCTGGAGTCGATAAGGTGCGCTCTCGCCGGTATGTATGCCGATATCCCCTTTATATGCGATGCAGCATATATCCAAATACCATATGACTAA 831 0.4717 MIRNGCVASPQVCVPLNSRPWKGVMPCSSFLCCTSQFPAKVAVSNIRSSSSFGHSFECKSSSPRGMTFSNMSVASSLLSSRVQNPLFHTIPVLPKRCGSTTTVRASKDVPTSWRYPQMTKKPRWWWRSLACLPYLMPLHETWMYAETAYNLHPFLEYFEFMTYPFLEAIGMLPSWFLMAYFFIAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSVYWGKIGMHFWTGVSFAYLFTVLESIRCALAGMYADIPFICDAAYIQIPYD 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60576g00012 276 NCBIfam Tic20 family chloroplast protein importer 1 276 IPR005691 -
Stsc60576g00012 276 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 33 276 IPR005691 -
Stsc60576g00012 276 Pfam Chloroplast import apparatus Tic20-like 100 269 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60576g00012 Stsc-Chr60576 60286 62581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60576g00012 37 276 Chloroplast and Mitochondria Gene Families AT4G03320 37.143 7.78e-47 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60576g00012 - - adu:107464071 553.132