Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60576g00010 ATGGGCGTGAACTCAACCACCACCACCGTCAAAATCCAATCGGAATTCCCGATCTCGATGCCAACTCCGCCCTTGGAGATCCACAACGTGCGGTTGCCGCCGCAGCGAAGCACCGCACAGAAGCTTAGGCAGAGACTCTCAGACATATTCTTCCCGGACGATCCACTTCACCGCTTCAAGAACCAACCGTCGTGGCTCGTCAAACTCATGCTCGGTGTTCAGTGCTTGTTCCCTATCTTCCAGTGGGGGCCAGCCTATAACCTCTCCCTCTTTCGCTCTGACGTCATCTCCGGCCTCACCATTGCTAGCCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGCTTGCAAACCTGCCACCTATTATTGGATTATATTCAAGTTTTGTGCCACCATTGATATATTCCCTGCTTGGAAGCTCTAAACATCTTGGTGTTGGTCCAGTTTCAATTGCATCTTTGGTAATGGGATCAATGTTGAGTGAAACAGTTTCTTTTACTCAAGATCCCATGCTATATCTCAAATTGGCTTTCACTGCCACTTTCTTTGCTGGTGTATTCCAATCTTCTTTGGGAATATTAAGGTTGGGATTTGTGATTGATTTTCTGTCAAAGGCAACACTGGTTGGATTCATGGCAGGAGCAGCCATAATTGTTTCATTGCAGCAGCTGAAAGGGTTGCTTGGAATAACGCACTTTACCAGCAAGATGCAAATAATTCCAGTATTAGCCTCCGTTTTCAAGGAAAAAGATGAGTGGTCATGGCAAACTATTGTACTGGGATTTGGATTCTTGGCCTTCCTCCTGATAACAAGACACATTAGCCTAAGGAAGCCAAACTTATTCTGGGTTTCAGCAGCTGCTCCATTGGCATCAGTTATTCTTTCAACTATTTTAGTCTTCCTCCTAAGAAACAAGGCTCATGGAATTGCATTTATTGGTGAATTGCCAAAAGGACTTAATCCACCATCATCAAACATGTTATTCTTCAGTGGTCCTTATTTGGCTCTTGCTATCAAAACTGGAATTGTCACTGGGATCTTGTCTCTTACTGAAGGAATTGCAGTTGGAAGAACATTTGCTGCACTTAAGAATTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTATCATGAACATAGCTGGTTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCGCGATCGGCTGTTAATTATAATGCTGGAGCACAGACAGCAGTCTCAAATATAATCATGGCTTCAGCAGTTCTCGTGACTCTTCTGTTTCTGATGCCTCTATTCTTTTACACGCCGAACGTCGTGTTAGCAGCCATTATCATCACTGCTGTGATTGGCCTAATAGATTACCAAGCTGCATATAAACTATGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCATGTGCTCCTTTTTCGGAGTTCTGTTCATCTCAGTGCCTTTAGGCCTTAGTATCGCGGTGGCAATATCAGTGTTCAAGATCTTGCTTCATGTCTCAAGACCAAACACACTGGTGTTGGGGAATATACCAGGGACAACAATATTCCACAATGTAAACCAGTATAGAGAAGCTCTTAGAATCCCTTCATTCCTCATTTTGGCTGTTGAGTCTCCTATCTACTTTGCTAATTCAACTTACCTTCAAGAAAGGATTTTGAGATGGATTAGAGAAGAGGAAGAGCATATCAAAGCAAACAATGGAAGTAAATTGGAGTGCATAATTTTGGACATGACAGCTGTGACAGCCATAGACACAAGTGGGATAGACACTTTATGTGAGCTTAGAAAGATGCTGGATAAAAGATCACTTCAGCTGGTGTTGGCAAATCCAGTTGGAAGTGTGATGGAAAAGTTGCATCAATCAAACATTTTGGATTCCTTTGGTTTGAAAGGAGTGTATCTCACAGTTGCTGAAGCTGTGGCTGACATTTCATCCTCTTGGAAAGCACAACCTTGA 1962 0.4332 MGVNSTTTTVKIQSEFPISMPTPPLEIHNVRLPPQRSTAQKLRQRLSDIFFPDDPLHRFKNQPSWLVKLMLGVQCLFPIFQWGPAYNLSLFRSDVISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGSMLSETVSFTQDPMLYLKLAFTATFFAGVFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGITHFTSKMQIIPVLASVFKEKDEWSWQTIVLGFGFLAFLLITRHISLRKPNLFWVSAAAPLASVILSTILVFLLRNKAHGIAFIGELPKGLNPPSSNMLFFSGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGIMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFFYTPNVVLAAIIITAVIGLIDYQAAYKLWKVDKLDFLACMCSFFGVLFISVPLGLSIAVAISVFKILLHVSRPNTLVLGNIPGTTIFHNVNQYREALRIPSFLILAVESPIYFANSTYLQERILRWIREEEEHIKANNGSKLECIILDMTAVTAIDTSGIDTLCELRKMLDKRSLQLVLANPVGSVMEKLHQSNILDSFGLKGVYLTVAEAVADISSSWKAQP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60576g00010 653 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Stsc60576g00010 653 ProSiteProfiles STAS domain profile. 522 645 IPR002645 -
Stsc60576g00010 653 Pfam STAS domain 523 641 IPR002645 -
Stsc60576g00010 653 Pfam Sulfate permease family 91 471 IPR011547 GO:0016020
Stsc60576g00010 653 CDD STAS_SulP_like_sulfate_transporter 523 638 - -
Stsc60576g00010 653 SUPERFAMILY SpoIIaa-like 527 644 IPR036513 -
Stsc60576g00010 653 PANTHER SULFATE TRANSPORTER 39 645 IPR001902 GO:0016020|GO:0055085
Stsc60576g00010 653 NCBIfam sulfate permease 78 641 IPR001902 GO:0016020|GO:0055085
Stsc60576g00010 653 Gene3D STAS domain 502 647 IPR036513 -
Stsc60576g00010 653 FunFam Sulfate transporter 31 502 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60576g00010 Stsc-Chr60576 35856 41753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60576g00010 25 653 Inorganic Solute Cotransporters AT3G15990 77.179 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60576g00010 K17471 - gmx:100780331 1100.5