Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60576g00002 ATGCCAAAGAAGATTAAAAAATCTCTAAGAAAATACATCTCCAAGATCAAGAACACTACTTCTCACCCACAAATTCAATTAATACCCTCCAAGAAATGGGTTCTCACAGGTTGCAAGCATCCAAAGACACCTTCTTTTTCCTTAGAAAACAAGAAAAAGGATTCTCAACACACCAACAAAGATGATGAAGCAACCTTAGCCGATGTCGATCGCTTCCTCTTTGAGAATTTCAAGTCGCTTTACCTAGAAGACAACGATGAAAAAGATGTCACTGCCACCGCCACCGCCACCAACAAAAAGGAGCATAATGACTCAAAAAAGGTGTCTAAAGAAGAAAATTATGATGATTACTATAGAGGTACAAAACTAGGACCTCCTATTTTTTATGATGACATGCCAATTGATCTACGTGGATCAAATCGATTCTTTATGACACGTGGATTTTCGGGGCCATATTCGGCTATGAATATGACCCCGAGGGGTGATGAATATGAAGGTGGATCAAGCTCAGCTTCAATAACAACACATAATGATTCGTCACCATCTTCACAATTATATCATAGTGCAATGACTCATGTACATGATCACAATCATGTTCGTGATTCTTTAAATCACCATCATGATTGTGATTGTGATCATGATCATAAGCTTTTGGATAACTGTGTGGCCGTGTTGGCGTCCTCGGAGAGCCCTTATGAGGACTTCAAGATTTCCATGCAAGGAATGGTGGAAGCAAGGGTAAGGAACAACCAAAGGGTGGATTGGGATTTTATGGAGGAGCTCTTGTTTTGTCATATAAATTTGAATGAGAAGAAGTCACACAAGTTCATACTAAGTGCTTTTGTGGAGTTGGTCACTGCCATGCGCCGACAGCCGGAGAATAATCCTCCGGCGACGGCTAGGAAGCCGCGGAGCGTTCGAACGGTGAGTATTGGGAGGCCTAGGGAGGTGAGGAACAAGACAAAAGAGGTAAATAACCGGTAA 984 0.4177 MPKKIKKSLRKYISKIKNTTSHPQIQLIPSKKWVLTGCKHPKTPSFSLENKKKDSQHTNKDDEATLADVDRFLFENFKSLYLEDNDEKDVTATATATNKKEHNDSKKVSKEENYDDYYRGTKLGPPIFYDDMPIDLRGSNRFFMTRGFSGPYSAMNMTPRGDEYEGGSSSASITTHNDSSPSSQLYHSAMTHVHDHNHVRDSLNHHHDCDCDHDHKLLDNCVAVLASSESPYEDFKISMQGMVEARVRNNQRVDWDFMEELLFCHINLNEKKSHKFILSAFVELVTAMRRQPENNPPATARKPRSVRTVSIGRPREVRNKTKEVNNR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60576g00002 327 MobiDBLite consensus disorder prediction 292 327 - -
Stsc60576g00002 327 Pfam Transcriptional repressor, ovate 228 287 IPR006458 -
Stsc60576g00002 327 MobiDBLite consensus disorder prediction 163 183 - -
Stsc60576g00002 327 NCBIfam uncharacterized plant-specific domain TIGR01568 222 288 IPR006458 -
Stsc60576g00002 327 ProSiteProfiles OVATE domain profile. 224 287 IPR006458 -
Stsc60576g00002 327 MobiDBLite consensus disorder prediction 309 327 - -
Stsc60576g00002 327 MobiDBLite consensus disorder prediction 160 183 - -
Stsc60576g00002 327 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 58 288 IPR038933 GO:0045892
Stsc60576g00002 327 MobiDBLite consensus disorder prediction 42 62 - -
Stsc60576g00002 327 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60576g00002 Stsc-Chr60576 7850 9137 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc60576g00002 Ovate 7.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60576g00002 - - ahf:112709854 427.557