Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60575g00015 ATGCTAGTACTATTCTCACACACCACAAACCAACCCGGTGGTGTCGGTCCTACAACTACGTCTTATATCTGGGCTAACAATAGACAAGTTCAAACAGCTCTTCACGTTCGAAAGGGAACCAAGATGGAATGGAGCAGATGCAATTGGAGTTTATCTTACACCTATGATATCACAACCACTGTACCATATCACAAGTATCTTACTAACAAAGACTATAAAGTTTTGATTTACAGTACAAACACATGGATAAAATCTCTGAATTTGTCGCTCAAACGAGACTGGTTACCATGGTATGTGGGTGGACAAGTGGGAGGATATGCATTGGAGTATGCACATGAGCAGAATTACAGCCTAGTGTTTGCAACTGTGAAGGGAGGAGGCCACACCGCACCAGAGTACAGGCCTGAGGAATGCCTTGCTATGATATCTAAGTGGCTTGCTGGTTTCACTATCTAA 456 0.4298 MLVLFSHTTNQPGGVGPTTTSYIWANNRQVQTALHVRKGTKMEWSRCNWSLSYTYDITTTVPYHKYLTNKDYKVLIYSTNTWIKSLNLSLKRDWLPWYVGGQVGGYALEYAHEQNYSLVFATVKGGGHTAPEYRPEECLAMISKWLAGFTI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60575g00015 151 SUPERFAMILY alpha/beta-Hydrolases 19 149 IPR029058 -
Stsc60575g00015 151 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 135 IPR001563 GO:0004185|GO:0006508
Stsc60575g00015 151 ProSitePatterns Serine carboxypeptidases, histidine active site. 118 135 IPR033124 GO:0004185
Stsc60575g00015 151 Gene3D alpha/beta hydrolase 4 150 IPR029058 -
Stsc60575g00015 151 Pfam Serine carboxypeptidase 20 147 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60575g00015 Stsc-Chr60575 72957 73919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60575g00015 12 148 Calmodulin-binding Proteins AT2G22960 39.490 6.62e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60575g00015 K16296 - qsu:111997404 169.474