Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60575g00014 ATGAGGAGGAGGAGATCAGGGATGAGAAGGGAATGGACGGTGGCGGTGTTGCAGGCTAGTGGAGAGATGGAGTCATTGGAGGCGGCAGGTAGGCAGGAGATAATGCGGAGGACAGGGGTGGCAGCACGTGACCTGAGGAGGCTGGTGTCCTCTTCCTCCAGCAGGAACAGGACCACCATTGTTGGCAGAGAGTGTAGCATAGTCATCAACTTGGAGCACATCAAAGCTATCATCACTGCAAATGGAGCTCTGTTCCTCAACTCCAAAGACCCCTCTCTCATCCCCCTTCTTCAACACCTTCATGACCGCATCATCCTCCCTCCTTCATCACCAATCAACATCCTTCCATTTGAGTTCGTCGCACTCGAGGCATGCCTTCAAGCTGCTTCCACTGCCTTGCAAAACGACGCAAATATACTAGAGCAGGAGTCTCATACCGCCTTGGGTAACCTCACTTTAGAGATTTGTACTCTCAATTTAGAGCGCGTTCGCCAAATTAAGAGCCGCTTAGTTTGCATTACTCGTCGTGCTCAAAAGGTTAGGGATGAGTTAGAGAACTTGCTGGATGATGATGAACACATGAGTGAGATGTATCTCACAAATAAATTAGCTCATCGCTCTCTTTCTTCGGATTCAATATCATCATCCAACAATCACAGGCACGTCAATAATTTGATTTTCTCACATCATTAA 693 0.4805 MRRRRSGMRREWTVAVLQASGEMESLEAAGRQEIMRRTGVAARDLRRLVSSSSSRNRTTIVGRECSIVINLEHIKAIITANGALFLNSKDPSLIPLLQHLHDRIILPPSSPINILPFEFVALEACLQAASTALQNDANILEQESHTALGNLTLEICTLNLERVRQIKSRLVCITRRAQKVRDELENLLDDDEHMSEMYLTNKLAHRSLSSDSISSSNNHRHVNNLIFSHH 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60575g00014 230 Gene3D Magnesium transport protein CorA, transmembrane region 92 226 - -
Stsc60575g00014 230 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 219 IPR039204 -
Stsc60575g00014 230 Gene3D - 2 88 - -
Stsc60575g00014 230 Coils Coil 170 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60575g00014 Stsc-Chr60575 68296 69084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60575g00014 1 202 MRS2 Gene Family AT1G16010 42.105 5.64e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60575g00014 - - gmx:100819578 186.037