Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60572g00013 ATGGAAGCTAGTGAGGAGCAAAATTATGGAGTGCGAAAACTGGAGATGTCAGATAAGGCCAAAGGCTTCATAGAGCTACTGCAACAACTCAGTGTTTGTGATTCTGTCTCTGACAAGGAGTTTCAGGATAGATTTCGAGAGCTCACTTCCCTTGGAGATGACCATGTTATCGCCGTCATTGAAGACCATGTTTCCGGCAAGATTATCGCCACCGGGAGCGTCTTCATCGAGAAGAAGTTTCTCAGAAACTGTGGCAAGGTTGGTCACATTGAAGATGTTGTTGTGGATCCCAGCGCTCGTGGGAAGCAACTGGGAAAGAAGATAATCAGTTTTTTAATGGATCATGCTCGTTCAATGGGCTGCTACAAGGTCATTCTTGATTGCAGCGTTGACAACAAGCTCTTCTATGAGAAGTGTGGCTTCAGGCAGAAAGAAATTCAGATGGTTAGATATTTTGTTTGA 462 0.4437 MEASEEQNYGVRKLEMSDKAKGFIELLQQLSVCDSVSDKEFQDRFRELTSLGDDHVIAVIEDHVSGKIIATGSVFIEKKFLRNCGKVGHIEDVVVDPSARGKQLGKKIISFLMDHARSMGCYKVILDCSVDNKLFYEKCGFRQKEIQMVRYFV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60572g00013 153 Pfam Acetyltransferase (GNAT) family 38 141 IPR000182 GO:0016747
Stsc60572g00013 153 Gene3D - 6 153 - -
Stsc60572g00013 153 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 11 151 IPR016181 -
Stsc60572g00013 153 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 3 148 IPR039143 GO:0004343|GO:0006048
Stsc60572g00013 153 CDD NAT_SF 57 127 - -
Stsc60572g00013 153 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 153 IPR000182 GO:0016747
Stsc60572g00013 153 FunFam Glucosamine 6-phosphate N-acetyltransferase 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60572g00013 Stsc-Chr60572 65975 66436 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc60572g00013 Acetyltransf_1 1.9e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60572g00013 K00621 - qsa:O6P43_005944 256.529