Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60572g00006 ATGGTGTCGCTCAAGAAACTTGCGAAGAAGGTAAGAACCGTGGGTAGTGGAGTAGTTGATCCTGCTCACCATGAGTGTTTGCTCAAGGAAGATCCACCGGAAAGCAACTTCAACGACGAAGACGACGACAGCAACAGCATTAGCAGAACCCCAACTGGTTTTTTCGCGGTTTACATTGGCGAAGAGCGGCAGAGATATGTGGCTCCAACAAGCTACCTCTCTCACCCGTTGTTCAAGATGCTGCTGGACAAGGCTTACGACGAATTCGGATTTGATCAGAGGAATGGATTGGTGGTTCCATGCAGTGTCTCCACTTTTCAGCAAGTCATCAATGTTATAGAATGTGGCAATGACAAGTTTGACTTACATAAGATTTTTGCCGAATTTGTTTCATAA 396 0.4571 MVSLKKLAKKVRTVGSGVVDPAHHECLLKEDPPESNFNDEDDDSNSISRTPTGFFAVYIGEERQRYVAPTSYLSHPLFKMLLDKAYDEFGFDQRNGLVVPCSVSTFQQVINVIECGNDKFDLHKIFAEFVS 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60572g00006 131 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 109 IPR003676 GO:0009733
Stsc60572g00006 131 Pfam Auxin responsive protein 41 112 IPR003676 GO:0009733
Stsc60572g00006 131 MobiDBLite consensus disorder prediction 28 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60572g00006 Stsc-Chr60572 29964 30364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60572g00006 51 123 Calmodulin-binding Proteins AT5G20810 53.425 2.94e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60572g00006 K14488 - gmx:100776885 173.711