Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60571g00006 ATGTTGGAATCTCTAGCTTATTGCCAAACCTTCAAGGGATATGACCTTACCAAGCAGAAGAGTCCTGGATGCTCTCATGGTCTTTCACGCATATGTAGAAGTTCAGTGTTCATGTTTTATTCATTCAGAAAGCAAGTAGCGCCGCAACCCCGATTTGCAAGTCATGGGATAGTTAACAGGAATTCTTTCTCAGAAGGTTTCTTTAGCAGCAAGCCTCTCCCTGTACCATTGTTTTTGGGAAGTAAAGGATTATATTCATCTAAGTATAGTCCTTCACGCTGGGAAAGACTGCAGACAAATGTAGCATATGATGTTGCTGGTGCTGTTGAAGTCATCAACGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTGACTGTCTTAATTGTACCCACACTCAAATCAATTAAAACCAGTCCTATACTTGGTTTCTTCTTTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAGATTTTGTCTGAATGGGGGATTCTTTTCTTGGTTTTACTATGTACTTTAGCATTTACTGCCTTTGAACTTCCACCAAATGGGGCTGTTGGAACGAAGATTTTGGAATTCCTTTTCCACTCAAGGCCTGATCTAGTGAACATCAGAAGTGTTGATGAAGCTGTAGTGATTGGTGCTGCTCTATCTCTATCATCATCTGCTTTTGTTCTTCAGTTACTTGCCGAGAAAGGTGAGCTTCCCACAAGATTTGGTTCAGCAACTCTGGGAATACTTCTTTTGCAGGACTTAGCTGTTGTTCCTCTTTTAGTCATTCTTCCAATATTAGAGACCCAGAATATGTCTGAGGAAAGTCTTTGGCCCATGCTTGTTCAAGAAAGTTTAAAGGCATTATTAGGATTGGGTCTTCTTTCTCTTGGAGCAAAGTACGTTCTCAGAAGAGTTTTCGAGGTTGTTGCGGATTCAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACCGTTGCTGGGATTTCACTAGGCACACAGAATTTGGGCTTCAGTGATACGCTTGGAGCATTTTTGGCTGGAGCAATCTTAGCTGAGACAAATTTCAGGACCCAGATTGAAGCAGATATAAGACCATTTAGAGGATTGCTTCTTGGGTTATTCTTCGTTACTACAGGAACTTCAATTGACATGCAGCTCCTTTTTCGAGAGTGGCCAAATGTACTTTCACTGTTGGCAGGTTTAATTGCTATCAAGACGCTGATCATAACGGCGATTGGTCCTCGTGTCGGACTTACTTTACAAGAAAGTGTGAGAATAGGATTGTTACTATCCCAGGGAGGCGAGTTTGGATTTGTAGTTTTCTCATTAGCAAATAGGCTTGGGGTGCTTCCACTTGAGCTTAACAAGCTGCTCATAATTGTTGTTGTGTTGTCAATGGCATTAACCCCTTTTCTGAATGAGGCTGGAAGAAGGGCTGCTAGTTTTTTGGAAGAAAAATCTAATACTGAGAATAAAGCTTCTGAGAAGATTAACTACAATGTCAGTGAGCCTGTTGTTATCCTTGGATTTGGGCAAATGGGTCAGGTCCTCGCCAATTTTCTGGGCAGTCCATTTGCTTCAGGAGTAGACAGTGTTTCGGTAGGATGGCCTTATGTGGTTTTCGATCTTAACCCATCAGTGGTAAAGGAAGCTCAAAAACTTGGTTTTCCCATTCTATACGGCGACGGATCACGTCCAGCTGTACTTCAATCTGCTGGTATCTCTTCTCCTAAAGCTATCATGGTTATGTACACTGGCAAAAAGAGGACAATTGAAGCTGTTCAAAGGTTGCGATTGTCTTTTCCCTCGATTCAAATCTATGCAAGAGCTCAAGATCTCAAACATCTTTTAGATTTGAAGAAAGCTGGTGCAACAGATGCTATTATGGAAAATGCAGAGACTAGCTTACAGCTGGGTTCTAAGCTTCTAAAAGGCCTTGGTGTGATGTCTGATGATGTAGTATTCCTTAGCCAGCTTATTAGGGATTCCATGGAGCTACAAGCTCAGGAAGCAGTTGGTTTATCCGATCGAGACTCAGATATTATGAAACCTCTACAGGTGAGAGTTTCCGACTTGATGGAGGCACGTGTAACGACAGCTTCGCCGGAACACGAACCATCAGAAATGAACCTGAAAGATCAAGCTTCATTGGGTAGAATTCAAGAGGAAGTGGTTGCTGAAGAACAAGATTATGAGCTAAAACAAGCTGTGAATTTACAAGGAAATGGTGCTCTAAATGGGAAACAAGCCACTGAAGATCAAATCTCAATCCCTTCCCATAATGCCATGGAGGAACCCTAA 2319 0.4191 MLESLAYCQTFKGYDLTKQKSPGCSHGLSRICRSSVFMFYSFRKQVAPQPRFASHGIVNRNSFSEGFFSSKPLPVPLFLGSKGLYSSKYSPSRWERLQTNVAYDVAGAVEVINDLGLDTLTFLAVTVLIVPTLKSIKTSPILGFFFAGVVLNQFGLIRNLTDVKILSEWGILFLVLLCTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILETQNMSEESLWPMLVQESLKALLGLGLLSLGAKYVLRRVFEVVADSRSSEAFVALCLLTVAGISLGTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLFREWPNVLSLLAGLIAIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFLEEKSNTENKASEKINYNVSEPVVILGFGQMGQVLANFLGSPFASGVDSVSVGWPYVVFDLNPSVVKEAQKLGFPILYGDGSRPAVLQSAGISSPKAIMVMYTGKKRTIEAVQRLRLSFPSIQIYARAQDLKHLLDLKKAGATDAIMENAETSLQLGSKLLKGLGVMSDDVVFLSQLIRDSMELQAQEAVGLSDRDSDIMKPLQVRVSDLMEARVTTASPEHEPSEMNLKDQASLGRIQEEVVAEEQDYELKQAVNLQGNGALNGKQATEDQISIPSHNAMEEP 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60571g00006 772 MobiDBLite consensus disorder prediction 750 772 - -
Stsc60571g00006 772 FunFam K(+) efflux antiporter 3, chloroplastic 174 486 - -
Stsc60571g00006 772 Gene3D - 508 678 - -
Stsc60571g00006 772 FunFam Glutathione-regulated potassium-efflux system protein KefB 508 679 - -
Stsc60571g00006 772 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 510 648 IPR036291 -
Stsc60571g00006 772 Gene3D - 114 487 IPR038770 -
Stsc60571g00006 772 ProSiteProfiles RCK N-terminal domain profile. 510 642 IPR003148 GO:0006813
Stsc60571g00006 772 Coils Coil 478 498 - -
Stsc60571g00006 772 MobiDBLite consensus disorder prediction 750 764 - -
Stsc60571g00006 772 Pfam TrkA-N domain 511 635 IPR003148 GO:0006813
Stsc60571g00006 772 Pfam Sodium/hydrogen exchanger family 121 479 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc60571g00006 772 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 100 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60571g00006 Stsc-Chr60571 16485 23084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60571g00006 1 759 Inorganic Solute Cotransporters AT4G04850 65.283 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60571g00006 K03455 - gmx:100798214 1124