Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60570g00006 ATGGATCAAGAGGAAGCAGCTCAAATTCCCAGAAGAACTACAAGGTCTTTGGCTTCATCTTCTGCCTCCACATCTAACAATGCATCTTCTGCAAAAGTAAATGGCCTTGAACCTCTAACAATCAATGACCTTTTAGTTGGAGGGGACCCTATTAGCCTAGATGAATTGATATCTAATTTCCCTGGAAGAAGTAGCCAGATTAATGAGATAGTGCGCCTTTTGGGCCCATTGAACACTCCGGTGCTTCCTTTGTTTGTGTATGGAGGTTCTTCCACTGGAAAAACCAGTATCATTCTTCAATTATTCCGGCATCTCAACCGGCCTCTTGTTTATTCTAGCTGCAGGACATGTTATAATCAGCGAATCTTGTTTGAATCTGTTATAAATCAGCTGCATCTTCATGGAAGAAGTGCTGCCAATGGCTATTCAAATGCAAAGCGCTGTGAGAGACCATCGGATTTTATTAATTTTCTTAGGGAAGCATTGACCGATGCCATAAACAATCTGAAGGAGAAGTCAGAGAAGTTGGTTTCAGGCAAGACAACGTTGCAAGGGGGGATTGGATACATGATCTACTTGGTAGTTGATAATTTTCAGCTTGTTAGGGAGTGGGATAAGAGCTCTATTATATTGCCCTTGCTATATAATCTCTATGATCTGCTAAAGATGCCTGAGGTTGGTCTAATTTTTATCAGCAATACTTCTCCGGACACCTTTTACTCTTCTAACATGGGTTATGTGGAGCCTATACCTGTATACTTTCCTGATTACACAGATGCTGATATTCGAAAAATATTGTTGAGAAACCAAGCAGATTCAAAGCTGTATTCCTCATTCTTGGAGTAA 846 0.4054 MDQEEAAQIPRRTTRSLASSSASTSNNASSAKVNGLEPLTINDLLVGGDPISLDELISNFPGRSSQINEIVRLLGPLNTPVLPLFVYGGSSTGKTSIILQLFRHLNRPLVYSSCRTCYNQRILFESVINQLHLHGRSAANGYSNAKRCERPSDFINFLREALTDAINNLKEKSEKLVSGKTTLQGGIGYMIYLVVDNFQLVREWDKSSIILPLLYNLYDLLKMPEVGLIFISNTSPDTFYSSNMGYVEPIPVYFPDYTDADIRKILLRNQADSKLYSSFLE 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60570g00006 281 MobiDBLite consensus disorder prediction 1 31 - -
Stsc60570g00006 281 Coils Coil 155 175 - -
Stsc60570g00006 281 Gene3D - 60 242 IPR027417 -
Stsc60570g00006 281 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 280 IPR020796 GO:0000808|GO:0005634|GO:0006260
Stsc60570g00006 281 FunFam Origin of replication complex subunit 5 60 242 - -
Stsc60570g00006 281 Pfam AAA ATPase domain 59 223 IPR041664 -
Stsc60570g00006 281 MobiDBLite consensus disorder prediction 10 31 - -
Stsc60570g00006 281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 268 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60570g00006 Stsc-Chr60570 14662 15507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60570g00006 3 281 Core DNA Replication Machinery Family AT4G29910 53.405 1.26e-106 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60570g00006 K02607 - gmx:100782175 417.927