Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60570g00005 ATGAAGAGAAAGTTATTTAGTCATATCAACCCTCACATTACCTCCTCTCTGAACGAGATATTTAAGGTTTCATCTCATCTTTCAGCTGAAGTTGAGAACTCCAAAGAGACAAAGCAGAAGGTGAATCAAAGGAAATTGGAGCGACGGGAAGAAACCGGCAAGCTAGATTTTCACATGTCTACTAGTGCAAAACCCTCTGAGAAGGTGCCTGAAAGAAAGGAAAGTTTAGAAGAGGAATTACTAATGAAAGGACCTGGAAGTTTCCCACTGGAGAGGTTGTTAGCCATCTTTCAGTGTATTGTATCGGTCGCAGAAGATCCATCGGATGAGGACGAACAAAATGGTATCGGATTAGGAGTTGAAGGTGGCAATGGTGGCCTAATGTCTGATGTTCTCTTGCAGCTATCTAGTCTCTGCAATGCTAAATTTATATTCAAAGGAAGAAACTGTCCAATTGAAGGCTCAGTTCGGTATCGGTCAACTATATCGGAAGACTTGGTTTTGAAGGTTGCAAGGAGCCTTAAATTCCCTCTATCAAGTTATTTGTATAAAAAACCTAGCAATCTTTTGACATTGGTGCTTCTGCTTCACAAATCCTGGTGA 603 0.4096 MKRKLFSHINPHITSSLNEIFKVSSHLSAEVENSKETKQKVNQRKLERREETGKLDFHMSTSAKPSEKVPERKESLEEELLMKGPGSFPLERLLAIFQCIVSVAEDPSDEDEQNGIGLGVEGGNGGLMSDVLLQLSSLCNAKFIFKGRNCPIEGSVRYRSTISEDLVLKVARSLKFPLSSYLYKKPSNLLTLVLLLHKSW 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60570g00005 200 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 1 64 IPR020796 GO:0000808|GO:0005634|GO:0006260
Stsc60570g00005 200 MobiDBLite consensus disorder prediction 32 71 - -
Stsc60570g00005 200 MobiDBLite consensus disorder prediction 32 57 - -
Stsc60570g00005 200 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 43 182 IPR047088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60570g00005 Stsc-Chr60570 13571 14470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60570g00005 1 185 Core DNA Replication Machinery Family AT4G29910 47.964 1.38e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60570g00005 K02607 - gmx:100784340 275.018