Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60563g00005 ATGGCAACACCATCACTACCCCTTCAATTCCTTCTCCTCACCCTCCTCCTCCTCCTCCTTCACACGTCAGCAAACACACCCCAATCAAGAAAACCGATCGCTAACAACCCCCTAACGGACTACATAAAGTCCTCATGCAAGGCCACGCGCTACCCCGCCGCGTGCCTCCAATCGCTAATGGCCTACGCAAACGCTATTCGCCAGAACGAACTGCGCCTAGTCCAAACCGCCTTAACCGTTAGCATTACCAGAACCCAGTCTTGCGCCTTCTTTGTCAAAACCGCGGCCCGTCAGAAGGGGATTCAGGCCCGGGAGGCCCAGGCCGTTAAAGACTGCTTGGACAACATGCACAGCAGCATCGACAGCCTGACCCAGTCCGCGAAAGAGCTCAACGGGCTCACGGGCCGGGCCTCGGCCCAGGACTTTGCGTGGCACATGAGTAACGTGCAGACATGGGTTAGTGCCGCTATGACGTATCAGAGCACGTGCCTTGATGGGTTTTCTGGGCCTTATTACCGAACTATGAATGGAAGATTCAAATCTGCGATAACTGCCAAGGTTGTTAATGCTTCTCAGGTTACGAGTAATGCTCTGGCTTTCGTTAATCGCTTTGCATCCAAGCACCTTACTCAAACTCCTAGTAATTAA 648 0.5324 MATPSLPLQFLLLTLLLLLLHTSANTPQSRKPIANNPLTDYIKSSCKATRYPAACLQSLMAYANAIRQNELRLVQTALTVSITRTQSCAFFVKTAARQKGIQAREAQAVKDCLDNMHSSIDSLTQSAKELNGLTGRASAQDFAWHMSNVQTWVSAAMTYQSTCLDGFSGPYYRTMNGRFKSAITAKVVNASQVTSNALAFVNRFASKHLTQTPSN 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60563g00005 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 204 IPR035513 -
Stsc60563g00005 215 SMART PMEI_2 37 200 IPR006501 GO:0004857
Stsc60563g00005 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 204 IPR035513 -
Stsc60563g00005 215 NCBIfam pectinesterase inhibitor domain 8 202 IPR006501 GO:0004857
Stsc60563g00005 215 CDD PMEI-like_3 44 206 - -
Stsc60563g00005 215 Pfam Plant invertase/pectin methylesterase inhibitor 41 199 IPR006501 GO:0004857
Stsc60563g00005 215 FunFam Pectinesterase inhibitor 3 38 205 - -
Stsc60563g00005 215 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60563g00005 Stsc-Chr60563 36767 37414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60563g00005 42 212 Carbohydrate Esterase AT3G14310 26.744 1.53e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60563g00005 - - jre:108984668 207.608