Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60561g00013 ATGTCGTTCCAAAATCTCCCTAACAAACCTTGCTATATGGCTGCATCTGTATCCTCTGATATGGCTTCAACCAACCATAACAATAATAATGGTGCAGTTTTAGTTGTTCCAATCAATAACGAACACGAGAAGAAGGAAGAACAAAACAAGCAAAAGCAAACACAAGAAGTAGTGATGACTGAAGAAGAAGAAGACAAGATTATTGACTACTCGCAAAGAGCACAGTGGCTTCGTGCCGCTGTAATGGGAGCCACGGACGGACTAGTATCAGTGGCTTCGTTAATGATTGGTGTGGGAGCGGTTCGAACCGATGCAAAACCAATGCTACTTGCTGGTTTTGCAGGTTCAGTTGCAGGAGGCTGTAGCATGGCTATAGGTGAGTTTGTTTCTGTTTACACACAGTATGAAGTTGAAGTTTCTCAAATGAAGAGGAAAATGAGTGGTGGTGGTTCTCAAGAAGAAGATGATGATGTGGAAATGAGAAAGAAAGCGTTACCAAATCCATGGCAAGCTGCATTGGCTTCTGCATCAAGTTATTGTTTAGGTGCAGTGGCTCCTTTGGTGGGAGCAGCGTTTATTAGAGACTACCGTACAAGGATTATGGTGGTTTTGGCGGTGGCTACTTTGGCTTTGTTTGTGTTTGGTTGGATTGGGTCTGTGCTTGGAAACACACCAATGGTTAAGTCTTGTGCTAGGGTTCTTCTTGGTGGTTGGATGGCTATGGCTATCACTTTTGGCTTAACCAAATTATTTGCTTTTACTGGTTTGCAGTAA 774 0.4302 MSFQNLPNKPCYMAASVSSDMASTNHNNNNGAVLVVPINNEHEKKEEQNKQKQTQEVVMTEEEEDKIIDYSQRAQWLRAAVMGATDGLVSVASLMIGVGAVRTDAKPMLLAGFAGSVAGGCSMAIGEFVSVYTQYEVEVSQMKRKMSGGGSQEEDDDVEMRKKALPNPWQAALASASSYCLGAVAPLVGAAFIRDYRTRIMVVLAVATLALFVFGWIGSVLGNTPMVKSCARVLLGGWMAMAITFGLTKLFAFTGLQ 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60561g00013 257 Coils Coil 43 65 - -
Stsc60561g00013 257 Pfam VIT family 77 152 IPR008217 GO:0005384|GO:0030026
Stsc60561g00013 257 Pfam VIT family 158 248 IPR008217 GO:0005384|GO:0030026
Stsc60561g00013 257 CDD Nodulin-21 75 225 - -
Stsc60561g00013 257 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 49 251 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60561g00013 Stsc-Chr60561 83811 84880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60561g00013 61 256 Nodulin-like Gene Family AT3G43660 60.204 6.60e-83 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60561g00013 K22736 - csav:115720046 253.062