Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60560g00012 ATGCCGAAGAAGGTTCAGAAAACCCTTCAGGATTACCTTGCAAAGGTTAAAAGCCCTCGCCATTCATCACAAAACCACCAATCACAGAAACCATTTAACTCCTTTTCATTTTCCTCCTCCAAAAACTGGATCATCAAAGCCTGCAAGCACCCAAGGACACCTTCTATTACCTTTGATGATTCCCATGGCGGTCGTCGCAGCGGCGACAACCACAAAGACGATGCGGCCACCCTGGCCGACGTTGATCGCTTCCTCTATGAGAATTTCAAGTCTCTGTATTTCAGAGAAGGTGAAGAAACCGAAGGCTACTACAACAACAACAAAGGAGGAGCCTCCTCGGGAGAGATCCAACACGATCAAGGTTCGAAACTCATACCGATGTTCGATTCACTGAGGTTGGCGGAAACACCACGCGACCTTGGTGGATCGAAAAGATTCTTCGTGAAAACTGCTTTGTCAGGATCACTGTTCCTCGATGATGGTTTAACAACGCGTAGCAGTGGCGATGATCATCACTATGGAGGATCAAGCTCAAACTCGACCGTAACGAACACCGATTCATCTTCGAATGATGAGAATCATCATGAGAATGATGAGAAGCTCCCTGAGAATTGCATCGCTCTGTTGAGAAGCAGTTCGAGCCCGTACGAGGATTTTCGGCGCTCCATGCAGGACGTGGTGGAAGCTAGGTTTAAAAGCCATGGAAAGGTCATCGATTGGGAGTTCATGGAGGAGTTATTGTTATCTTACCTGAACCTGAACGAGAAGAAGTCGCACAAGTTCATACTCAGTGCCTTCGTGGATGTAACCGCCGCCATGCGTCCGAATTCAGAAATGACGGATCCCCATCCCCGGAGCGTTCGAACTGTGAGGTTTGGAAGGGAAGGGGCCAAGAAGACCAAAGAATTTACCTTAGAATTTGGGTCCTCTAATTGA 936 0.4786 MPKKVQKTLQDYLAKVKSPRHSSQNHQSQKPFNSFSFSSSKNWIIKACKHPRTPSITFDDSHGGRRSGDNHKDDAATLADVDRFLYENFKSLYFREGEETEGYYNNNKGGASSGEIQHDQGSKLIPMFDSLRLAETPRDLGGSKRFFVKTALSGSLFLDDGLTTRSSGDDHHYGGSSSNSTVTNTDSSSNDENHHENDEKLPENCIALLRSSSSPYEDFRRSMQDVVEARFKSHGKVIDWEFMEELLLSYLNLNEKKSHKFILSAFVDVTAAMRPNSEMTDPHPRSVRTVRFGREGAKKTKEFTLEFGSSN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60560g00012 311 MobiDBLite consensus disorder prediction 167 200 - -
Stsc60560g00012 311 NCBIfam uncharacterized plant-specific domain TIGR01568 206 273 IPR006458 -
Stsc60560g00012 311 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 34 272 IPR038933 GO:0045892
Stsc60560g00012 311 ProSiteProfiles OVATE domain profile. 208 272 IPR006458 -
Stsc60560g00012 311 Pfam Transcriptional repressor, ovate 212 272 IPR006458 -
Stsc60560g00012 311 MobiDBLite consensus disorder prediction 169 188 - -
Stsc60560g00012 311 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60560g00012 Stsc-Chr60560 60344 61279 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc60560g00012 Ovate 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60560g00012 - - adu:107459577 486.493