Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc60560g00003 | ATGACAGCTGTGACAGCCATAGACACAAGTGGTCTTGACACATTATGTGAACTTAGGAAGATGCTGGAGAAAAGATCACTTCAGCTTGTGTTAGCAAATCCTGTTGGGAGTGTGATGGAAAAGTTACATACATCAACAGTTTTGGATTCCTTTGGATTGAAAGGTGTTTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCATCATCCTGGAAAGCTGAGCCTTGA | 228 | 0.4254 | MTAVTAIDTSGLDTLCELRKMLEKRSLQLVLANPVGSVMEKLHTSTVLDSFGLKGVYLTVGEAVADISSSWKAEP | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc60560g00003 | 75 | CDD | STAS_SulP_like_sulfate_transporter | 1 | 60 | - | - | |
| Stsc60560g00003 | 75 | ProSiteProfiles | STAS domain profile. | 1 | 67 | IPR002645 | - | |
| Stsc60560g00003 | 75 | Gene3D | STAS domain | 1 | 75 | IPR036513 | - | |
| Stsc60560g00003 | 75 | SUPERFAMILY | SpoIIaa-like | 1 | 66 | IPR036513 | - | |
| Stsc60560g00003 | 75 | Pfam | STAS domain | 1 | 63 | IPR002645 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Stsc60560g00003 | Stsc-Chr60560 | 20783 | 21602 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Stsc60560g00003 | 1 | 74 | Inorganic Solute Cotransporters | AT3G15990 | 70.270 | 2.94e-31 | 112 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc60560g00003 | K17471 | - | gmx:100812617 | 136.732 |