Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60559g00004 ATGGCAAATCACCATTTTAGCCATAACTCGTTATTATTGTTTTCTCTCTTTCTCATATTGGTGCAAATCCAAACTATAGTTCATTGCTTCCAATACAAGGTTGGAGATCTAGATTCTTGGGGCATTCCCACCTCATCAAATCAACAACTATACACCAAATGGGCTAAAAACAATGATATCAAGATTGGTGACTCTCTTTTGTTTCTGTACCCACCAAGTCAAGATTCATTGGTTCAAGTAACATTGGAAAACTACAGGAGCTGCAACATTAAGAACCCTATATTGTACATGAACAATGGCAACTCATTGTACAACATCACATCAAAAGGTGAATACTTCTTCACAAGTGGAGAGCCAGGGCACTGTCAGAAGAATCAGAAGATTCATATAACTGTTGGTGTTAATGCTTCTTCAGATGCTCCATCACCATATGGATCACCAACTTCTGCTGCTGCTCCTTCTTATCAACCTGTTTTTGGCACCATTCCACAGCCTCCTTCTCAATCCATGGTAGCCTCAGATTCATCTCACATCATAGCTTCAAATTCTCAAGCTCTCATCATTGGATTTGTGATGTTTGGTCTCCTCTCTGCCTTAATGTAA 603 0.3947 MANHHFSHNSLLLFSLFLILVQIQTIVHCFQYKVGDLDSWGIPTSSNQQLYTKWAKNNDIKIGDSLLFLYPPSQDSLVQVTLENYRSCNIKNPILYMNNGNSLYNITSKGEYFFTSGEPGHCQKNQKIHITVGVNASSDAPSPYGSPTSAAAPSYQPVFGTIPQPPSQSMVASDSSHIIASNSQALIIGFVMFGLLSALM 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60559g00004 200 PANTHER BLUE COPPER PROTEIN 29 152 IPR039391 GO:0009055
Stsc60559g00004 200 Pfam Plastocyanin-like domain 48 125 IPR003245 GO:0009055
Stsc60559g00004 200 FunFam Early nodulin-like protein 1 29 137 - -
Stsc60559g00004 200 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Stsc60559g00004 200 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Stsc60559g00004 200 CDD OsENODL1_like 30 132 IPR041846 -
Stsc60559g00004 200 Gene3D - 30 143 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60559g00004 Stsc-Chr60559 11719 12952 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60559g00004 11 163 Phytocyanin Superfamily AT1G64640 52.597 9.88e-53 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60559g00004 - - gmx:100527661 236.113