Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60557g00009 ATGGCGATGGCTCAGGGAACGGGAATAGGGCGTAGCAGCAGCATGAATAGCAGCAGTAGCAGCAGGGTCATAGGGGAGTACATAGTTGGAAGAGAGATTGGTTCCGGTTCGTTCTCGCGGGTTTGGCATGGAAGGCACAAGGTTCATGGCACTGAGGTCGCCATCAAAGAGATCGCAACCCAACGTCTCAATAACAAGCTTCATGATAGCCTCATGTCCGAGATTTTCATCCTCAAGCGAATTAACCACCCTAACATCATTCGTTTGCACGATATCATTCAGGCTCCTGGTAAGATAAATCTTGTGTTAGAGTATTGTAAAGGGGGAGACCTATATTTTTACATTCAACGCCATGGAAGGGTACAGGAGGCAACTGCAAAGCATTTTATGCAGCAGCTGGCTGCTGGTCTACAAGTTCTCCGGGACAATAACGTAATTCATCGAGATCTAAAACCACAGAACCTCCTTCTGTCAAGAAATGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCCAGATCTCTGCAACCTAGGGGCCTTGCAGAAACCCTTTGTGGTTCACCACTCTACATGGCTCCAGAAATAATGCAACTACAGAAGTATGATGCAAAGGCAGATCTCTGGAGTGTTGGTGCAATCTTATTTCAGCTTGTAACAGGAAGAACACCTTTTACTGGAAACAATCAAATACAGAAATTGCTACGCCGAAATCCAGGTTCCTGTTCGAAAGTGGAACGTCTTACTTTTGAAGAATTCTTTAACCATCCATTCCTTTCTGAGAAGCAACCAGAACGGAATGAACCGTTGAGGAACAGAAGTTCATCAAGGCTGGTAGGTGGATTTAGTTCAGCAGAATCCGACCCCTTAAGAAGGACTGAGGAAAATTATCAAGAGGATTGCTTACCGTTCTTTCTAGATGATGATTCTAGTGGTCCTGAGGGGAGTCCTTCCTTTTCAAAGAAGTCCTCAATCAAGTCTACCATTGGATTTGATCTACATACAAAACTAGATAAACCAGAGCCAGCATCTCCTGTTGCTAATAACATAAATTATACCTCCAGATACAGTAGTGTAACACAGAGACCGGAAAGCACTACTAAAAGATTGGACAAGCCTAAAGTATCAGAAAGAAATCTCGCTGGTCCTTTAGAATCTCTAGAACAAAGATTTGTTGATTCTCATTCAAAAGTTACAGATTCCCTAGAGAATATTGATCAAGACTATGTTCTTGTGTCTGGGCCCCCTATGGATGCTTCCTCATCTTCAGCGAGTGCTTCAAAGCCAAGCCATTCCCCATTTAGGTCAAGTAGTCTTCCACAAGAGTCTTCAAAAACAATCACTAGATTAAGTGCTCCAATGCCAATTGTTGGAGTTCCTACCAGTAGCATATGCCAGATTGGAAGCTCAGAAAGTCAGGACTCTGCTCCTGGGACATCACATGGATCAATGGATACAGGTGATGAGCAGCCGTCAGCTAATTGCATGACAAGGATTAAATCATTGCGACAGTGTGCATCTGCGATCACAGAATTAGTTAATGAAAAGATGGAGGCAGGAAAGCCGCTAGAAGCATTCTCTATTCAGCTTGTAATTCTTGCCATTTGGAAGCAAGCACTGCATATATGCCATACACGAGCTGCCTCGGCTATGGAAGGAAGTCCAAATCAAGAAACTTTAAGATACAGGAGGAGTGCAAGCAAGAAGCATGGTAGTTCTGATTCAGAAGAATGCTTTGATGGAAACACCCAAGGGTCAAAGGATATGCTAGCTCAAATTGAAAGTGAGTTTCTGAAGGAATTTGAGCATGCTGAAGAACTTTCCAAAGCCATTGAACCTGGAAACACACAGATGCCAGATGCAATGGAGACGATTTTCCAATCTGCCCTTGCTTTTGGGAGACATGGGGGTGTGGAAGAGCTCATGGGAGAAATGGAAAGTGCAGCTGCATTGTATTTGAAGGCAGTCCGCCTGTTACTCTTCCTACTAGTTGAAGCACCATCCTTGATTCTCAATCCTCCATTCTCTCTGACCAACTCGGACCGATACAGGTTACGGAATTACATCGATATTCTCAATAACAGGCAAGGCTATTCGAGATCGCAGCGGATGACACTTCTGAAATGTGACGACAGTCAAGGCATCCTGAAGGAAAAGTTTTAG 2166 0.4391 MAMAQGTGIGRSSSMNSSSSSRVIGEYIVGREIGSGSFSRVWHGRHKVHGTEVAIKEIATQRLNNKLHDSLMSEIFILKRINHPNIIRLHDIIQAPGKINLVLEYCKGGDLYFYIQRHGRVQEATAKHFMQQLAAGLQVLRDNNVIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQKLLRRNPGSCSKVERLTFEEFFNHPFLSEKQPERNEPLRNRSSSRLVGGFSSAESDPLRRTEENYQEDCLPFFLDDDSSGPEGSPSFSKKSSIKSTIGFDLHTKLDKPEPASPVANNINYTSRYSSVTQRPESTTKRLDKPKVSERNLAGPLESLEQRFVDSHSKVTDSLENIDQDYVLVSGPPMDASSSSASASKPSHSPFRSSSLPQESSKTITRLSAPMPIVGVPTSSICQIGSSESQDSAPGTSHGSMDTGDEQPSANCMTRIKSLRQCASAITELVNEKMEAGKPLEAFSIQLVILAIWKQALHICHTRAASAMEGSPNQETLRYRRSASKKHGSSDSEECFDGNTQGSKDMLAQIESEFLKEFEHAEELSKAIEPGNTQMPDAMETIFQSALAFGRHGGVEELMGEMESAAALYLKAVRLLLFLLVEAPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKCDDSQGILKEKF 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60557g00009 721 Gene3D Transferase(Phosphotransferase) domain 1 17 301 - -
Stsc60557g00009 721 SUPERFAMILY Protein kinase-like (PK-like) 23 261 IPR011009 -
Stsc60557g00009 721 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Stsc60557g00009 721 FunFam Non-specific serine/threonine protein kinase 11 107 - -
Stsc60557g00009 721 MobiDBLite consensus disorder prediction 413 446 - -
Stsc60557g00009 721 SMART serkin_6 27 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60557g00009 721 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 13 630 IPR045269 GO:0004674|GO:0006914
Stsc60557g00009 721 MobiDBLite consensus disorder prediction 563 577 - -
Stsc60557g00009 721 MobiDBLite consensus disorder prediction 347 365 - -
Stsc60557g00009 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Stsc60557g00009 721 FunFam Maternal embryonic leucine zipper kinase 19 245 - -
Stsc60557g00009 721 Pfam Protein kinase domain 28 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60557g00009 721 MobiDBLite consensus disorder prediction 262 324 - -
Stsc60557g00009 721 ProSiteProfiles Protein kinase domain profile. 27 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60557g00009 721 MobiDBLite consensus disorder prediction 417 446 - -
Stsc60557g00009 721 CDD STKc_ATG1_ULK_like 33 259 - -
Stsc60557g00009 721 MobiDBLite consensus disorder prediction 551 585 - -
Stsc60557g00009 721 MobiDBLite consensus disorder prediction 463 493 - -
Stsc60557g00009 721 MobiDBLite consensus disorder prediction 462 493 - -
Stsc60557g00009 721 MobiDBLite consensus disorder prediction 336 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60557g00009 Stsc-Chr60557 32961 40860 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60557g00009 23 230 CBL-interacting serine-threonine protein kinases AT2G30360 40.187 2.51e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Stsc60557g00009 Pkinase 1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60557g00009 K08269 - gmx:100791596 1098.96