Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60552g00005 ATGCACACGAGAAGAACTGTTGGATACTTTGCACCTGAATGGTTCACGAAAGCTTCGATCACAAGCAAAGTCGATGTTTACAGCTTTGGAGTGGTGTTGTTGGAGCTCATATGCTGCAAATCGAGTATTGTGTTTTCAATGTCGAATGAAGAAGAACAAGAACTCATATATTGGGCATATGATTTCTATAGACATGGAAAATTGGGAACTAAACTTGAGGAACCAAGCCCTAGCCGAACCTACAAGGGTGTTTATTGTCCATTCTTTGGCTATTTCAAGTGA 282 0.4043 MHTRRTVGYFAPEWFTKASITSKVDVYSFGVVLLELICCKSSIVFSMSNEEEQELIYWAYDFYRHGKLGTKLEEPSPSRTYKGVYCPFFGYFK 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60552g00005 93 Gene3D Transferase(Phosphotransferase) domain 1 1 85 - -
Stsc60552g00005 93 ProSiteProfiles Protein kinase domain profile. 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60552g00005 93 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 71 - -
Stsc60552g00005 93 SUPERFAMILY Protein kinase-like (PK-like) 3 60 IPR011009 -
Stsc60552g00005 93 Pfam Protein tyrosine and serine/threonine kinase 3 57 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60552g00005 Stsc-Chr60552 38485 40352 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60552g00005 6 73 Receptor kinase-like Gene Family AT5G39000 41.176 3.76e-12 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc60552g00005 PK_Tyr_Ser-Thr 3.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60552g00005 - - ahf:112707732 126.331