Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60550g00012 ATGGAAAAGAAGAACCCTTCCCCCTCCTCTCCTTCGACCCCCACCACCGAACCACCTACTGAATTTCTGAAGTCAGTGGAAGAAGTGTTGGCGGATCTGACCGCTGCTTTTACTGAAGCAAGCGGTGGAAACCCCCCTCCTCCTCCACCACCTCCTATTGCGAGAGCAATGGCGGTTGGTGTTGGTGGAGAAAGGGCGGTATTGGGTGAAGTGGGTTCTGGTGGAGTTGGTGCAATTGGTGGTGGAAGGAAAAGAAAGGCATCAGAAGTGAAAGACCCTCCAAGAGGAACACCAACATGCCCTGTTTGTAACAAAACTTTCGGAAGTTGGAAAGGTGCTTTCGGACACATGAGGAAGCACCCTGAACGCCAATACCGTGGCTTCTTCAGGCCACCTACTTTCGACGCCGAACACGACCCTGCTACTGGTGGTGCAACCACCCACGGTTCTGGTGAAGGAGGAAGCAGTGGTGGCGGCGCCACCAGCGGGCAGATTGGAGAGGGTGGATCATCATCTGTTCGTGGCCAATTTGATCTGAACCAGCCAATGGAGAGAGGAGAAGACGGTGGTGAACAAGGAAATGCTGCTGGTGAAGGAAAAGTTTTAGGGTTTGATCTGAATATGCCTGCCGATGATGAAGAAGACGATGAGTGA 654 0.5275 MEKKNPSPSSPSTPTTEPPTEFLKSVEEVLADLTAAFTEASGGNPPPPPPPPIARAMAVGVGGERAVLGEVGSGGVGAIGGGRKRKASEVKDPPRGTPTCPVCNKTFGSWKGAFGHMRKHPERQYRGFFRPPTFDAEHDPATGGATTHGSGEGGSSGGGATSGQIGEGGSSSVRGQFDLNQPMERGEDGGEQGNAAGEGKVLGFDLNMPADDEEDDE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60550g00012 217 MobiDBLite consensus disorder prediction 148 178 - -
Stsc60550g00012 217 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 81 139 - -
Stsc60550g00012 217 MobiDBLite consensus disorder prediction 70 104 - -
Stsc60550g00012 217 MobiDBLite consensus disorder prediction 1 20 - -
Stsc60550g00012 217 MobiDBLite consensus disorder prediction 1 22 - -
Stsc60550g00012 217 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Stsc60550g00012 217 MobiDBLite consensus disorder prediction 127 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60550g00012 Stsc-Chr60550 62926 64235 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60550g00012 92 134 C2H2 Transcription Factor Family AT4G35280 51.163 3.01e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Stsc60550g00012 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60550g00012 - - adu:107487295 164.081