Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60550g00011 ATGGAAATGGAAATGGACAAGAATAATTCTTCTTCTGCATCCGCCTCAGTTACTACCCTATCCCCTTCAACCCCCGTTACTGAACCATCGCCGTCACCACCACCACCACAACCCGTTGCTGTTCCTTCATCACCAATTGTTGATGAACCCAATAACTTAAGTGATGATGAAGAAGGAAAATCACCGGTTGTTAATCAGACACCGGAGGAAGTCCTGGCAGATCTCACAACAAATGATGGTACTACCACCATCGGAGGAAACCCTCCACCACCACCACCTATCCCTGGACTTAAAAGGCGAAGAAAGGCTCCTCAAATTAAGGATCCTCCAACTGGTGCACCAATATGCCCAGTTTGTAACAAAACATTTCATTGTTGGAAGGCAGCCTTTGGACACATGAGAACACACCCAGATCGTGAGTACCGTGGCTTCTTCAGGCCCCCGAATTTCTCCTCTTCTCTCCCTGCACCCGCCACCGGTCAGGCTGCTGGTGGTGGCGAAGGAGGAGCTACAGCGCCGGTTCGCAACCGGATTGACCTCAACCACGTGCCGATGGTGGAGGGAGTGGAGAAAATACAAATTGTAGCGTGGTTTGACCTCAACAGGAGGCCTGCAGATGATCGAGATGACTACAACAACATGCCATGA 648 0.5031 MEMEMDKNNSSSASASVTTLSPSTPVTEPSPSPPPPQPVAVPSSPIVDEPNNLSDDEEGKSPVVNQTPEEVLADLTTNDGTTTIGGNPPPPPPIPGLKRRRKAPQIKDPPTGAPICPVCNKTFHCWKAAFGHMRTHPDREYRGFFRPPNFSSSLPAPATGQAAGGGEGGATAPVRNRIDLNHVPMVEGVEKIQIVAWFDLNRRPADDRDDYNNMP 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60550g00011 215 MobiDBLite consensus disorder prediction 1 109 - -
Stsc60550g00011 215 ProSitePatterns Zinc finger C2H2 type domain signature. 116 136 IPR013087 -
Stsc60550g00011 215 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 30 154 - -
Stsc60550g00011 215 MobiDBLite consensus disorder prediction 1 25 - -
Stsc60550g00011 215 MobiDBLite consensus disorder prediction 26 43 - -
Stsc60550g00011 215 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60550g00011 Stsc-Chr60550 58436 59391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60550g00011 62 154 C2H2 Transcription Factor Family AT2G17180 36.559 1.62e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60550g00011 - - adu:107487295 123.635