Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60549g00008 ATGGCACTGTGCAGCCGAATCAGATCGGGGATTTCACTCTTTAACAAATTAGGATTTGCCGCTTCCCAGAGATCCACTCTCCAACGATCTCTCATTGCCCCTTCCTCTTCCCTGGTCTCCAGAGGTTATGCCAATGTGCCAGGTTCAAGGGAAAGCAAAGTTAAGGTCCCACTGGCTATGTTTGGTGGCTCAGGAAACTATGCCACTGCTTTGTATATTGCAGCAGTGAAAGCTAATTCAGTGGATAAGGTTGAGTCTGAGATTCTTCAGTTTGTTGAGGCGGTTAAGAATAGTACTAAAGTTTCACATTTCATAAGTGACGTGTCTGTGAAGAAAGATATTAGAGTAAAGGTTATTGAAGACATTGCTGGTCAATCTAAGTTTTCTGATATTACGAAGAACTTCCTTGTCATTGTTGCTGAGAATGGGAGGCTTAAAAACATTGAGACTATTGCAAAGAGGTATAGGGAGTTGGCAATGGCATACAAGGGAGAAGTGAAAGCCATTGTGACAACAGTCATTCCTCTCCCTGCTGAGGAAGAAAAGGCACTAAAGGAGACCCTTCAGCAGATGTTGGGCACTGGGGCCAAGGTTCATCTTGAGCAGAAGGTATCAGTGTGA 621 0.4412 MALCSRIRSGISLFNKLGFAASQRSTLQRSLIAPSSSLVSRGYANVPGSRESKVKVPLAMFGGSGNYATALYIAAVKANSVDKVESEILQFVEAVKNSTKVSHFISDVSVKKDIRVKVIEDIAGQSKFSDITKNFLVIVAENGRLKNIETIAKRYRELAMAYKGEVKAIVTTVIPLPAEEEKALKETLQQMLGTGAKVHLEQKVSV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60549g00008 206 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Stsc60549g00008 206 PRINTS ATP synthase delta subunit signature 133 144 IPR000711 GO:0015986|GO:0046933
Stsc60549g00008 206 PRINTS ATP synthase delta subunit signature 144 158 IPR000711 GO:0015986|GO:0046933
Stsc60549g00008 206 Pfam ATP synthase delta (OSCP) subunit 65 204 IPR000711 GO:0015986|GO:0046933
Stsc60549g00008 206 PANTHER ATP SYNTHASE DELTA CHAIN 39 204 IPR000711 GO:0015986|GO:0046933
Stsc60549g00008 206 NCBIfam ATP synthase F1 subunit delta 66 204 IPR000711 GO:0015986|GO:0046933
Stsc60549g00008 206 Gene3D - 63 156 IPR026015 -
Stsc60549g00008 206 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 164 IPR026015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60549g00008 Stsc-Chr60549 77956 82040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60549g00008 79 205 Primary Pumps ATPases AT5G13450 43.939 3.56e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60549g00008 K02137 - gmx:100790990 310.842