Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60543g00009 ATGAGTTCAACTGTGGCCAACCATCATCCCCTACTATCTTCAGCCTCCACCGCTTCAGCCGAACAACACAAATCCCTAACCAACTTTCCCGCCAAATCACAACGCCCAACTTTCTCAACCCTTAACTTCCGCCCCAATCACCATCCTCCTCCTCCTCCACCTTCAGGTCCAAATCTTGTGGTTGGAAGGAGAGGGCTAATATCCATAGCCACTTTGCCATGTCTCGTTCCCCTAACTCAGATTTTGGGTTGTCTTCAAGCCAATGCAGCACAGTCTAGTACAAAGGAATATCTTCTCATTAAAGAAGAAGTAAGAAAGGTATTGTCGAAGGGGAAAGCTGCGGGCGTGCTTCGTTTGGTTTTCCATGATGCGGGAACCTTTGACATGGATGACAAGACAGGTGGTATGAATGGTTCTATAGTTTATGAACTTGAAAGACCTGAAAATTCTGGCCTAAAAAAATCAATAAAGGTTCTGCAGAAAGCAAAGATACAGATAGATGCTATCCAACCAGTATCCTGGGGGGACATGATTGCTGTTGCTGGTGCCGAAGCAATCGAAATATGTGGAGGTCCATCGATCCAAGTTTCTTTGGGCAGACTAGATTCACCGGGGCCTGACCCTGAAGGGAAACTTCCTGAGGAATCTCTCAATGCTTCCAGTTTGAAGAAATGCTTCCAGAGAAAAGGCTTTTCAACACAAGAACTTGTAGCTTTGTCTGGAGCCCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCAACTTCTTTTGACAATGCATATTATAAGATTCTTTTGGAGAAGCCTTGGGCAAATCCAGGTGGTATGTCAAGTATGATTGGCCTTCCTTCGGATCACGCACTTGTTGAGGATGAGGAATGCTTAAGTTGGATCAAGAAATACGCAGAAAATGAGAACATGTTCTTTGAAGATTTCAAGAATGCATATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAATAGCTTATAA 987 0.4438 MSSTVANHHPLLSSASTASAEQHKSLTNFPAKSQRPTFSTLNFRPNHHPPPPPPSGPNLVVGRRGLISIATLPCLVPLTQILGCLQANAAQSSTKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFDMDDKTGGMNGSIVYELERPENSGLKKSIKVLQKAKIQIDAIQPVSWGDMIAVAGAEAIEICGGPSIQVSLGRLDSPGPDPEGKLPEESLNASSLKKCFQRKGFSTQELVALSGAHTLGSKGFGSPTSFDNAYYKILLEKPWANPGGMSSMIGLPSDHALVEDEECLSWIKKYAENENMFFEDFKNAYVKLVNSGVRWNSL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60543g00009 328 ProSitePatterns Peroxidases active site signature. 113 124 IPR019794 GO:0004601
Stsc60543g00009 328 Gene3D Peroxidase, domain 2 213 315 - -
Stsc60543g00009 328 Pfam Peroxidase 102 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 SUPERFAMILY Heme-dependent peroxidases 95 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 MobiDBLite consensus disorder prediction 1 59 - -
Stsc60543g00009 328 PRINTS Haem peroxidase superfamily signature 113 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 PRINTS Haem peroxidase superfamily signature 172 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 PRINTS Haem peroxidase superfamily signature 190 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 FunFam L-ascorbate peroxidase 103 220 - -
Stsc60543g00009 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 235 245 IPR019793 -
Stsc60543g00009 328 MobiDBLite consensus disorder prediction 1 44 - -
Stsc60543g00009 328 Gene3D - 101 322 - -
Stsc60543g00009 328 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 84 326 IPR044831 GO:0004601|GO:0034599
Stsc60543g00009 328 FunFam Adenylate/guanylate cyclase 213 315 - -
Stsc60543g00009 328 PRINTS Plant ascorbate peroxidase signature 299 323 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 PRINTS Plant ascorbate peroxidase signature 131 141 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 PRINTS Plant ascorbate peroxidase signature 211 228 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 PRINTS Plant ascorbate peroxidase signature 229 250 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 PRINTS Plant ascorbate peroxidase signature 113 128 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 PRINTS Plant ascorbate peroxidase signature 190 202 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 PRINTS Plant ascorbate peroxidase signature 171 189 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc60543g00009 328 ProSiteProfiles Plant heme peroxidase family profile. 113 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60543g00009 Stsc-Chr60543 54042 58183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60543g00009 113 326 Peroxidase AT4G16270 30.216 5.67e-22 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60543g00009 K00434 - gmx:100792735 472.241