Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60541g00009 ATGGCTGATAAATATGGCCCTATATTCCAAATCTATTTCGGATCATTACCCGCCATTGTAGTCTCCAACAAAGAAGGAATCAAAGAATGTTTCACCACGAACGACAAAGTTCTCGCCTCGCGCACCCCATCAAGCCGGGGAACTCACCTTGCTTATAACAATGCCTCCTTTGGATTTGCTCCTTATGGACCCTATTGGGCAAAACAGAGGAAGCTCGCCGTTCTCGAACTCCTCTCCTCTCGCGGTCTCGAATCCTTGAGGCATGTTTTTGAATCCGAGATTGATACTTTGATCAAGGATCTCTTGATTCATTCTTCCTTGGGCAACAAGGCTGTTGTGATGAGTGAATGGTTTGAACGGTTGACTTTCAACATAATCACAAAGATGGTGGCTGGAAAGAGGTATTTTAGTTACTTGGAGGATGTGGATGATTTAGAAGCACATAAAGTTGTGAATCTCATAAAAGAGTTCATGCAATTGGCTGGTGGATTTGTTCTTTCGGATGCAATTCCATTGCTTAGGTGGATTGGTGTGGAAGGGAGAGTTCTTAAATCAATGAAGAGAATTGGAACAGATTTGGACACACTTATTGGAGGGTGGGTTGAAGAGCATAAGATGAAGGGTAATATGGTAAATAGCTCAAGTGATGATGAGAACAAAGATTTCATTCATGTCTTGCTATCTATTGTTGAAGATGATCCTGAGTCTGGCCATTCTCGTGACACTATCATCAAGGCACATGTTATGAATCTTATCCTAGCGGGGACGGAAACAACATCAACAACAATGACATGGATCCTTGCAGTTTTGATGAACAACAACCATTCATTGAAGAAAGCACAACAAGAGATTAGCCTCCATGTGGGTAAGGACAGAAAGGTAGAAGCCTCAGATCTAAAAAACCTCACTTATTTACAAGCAATTTTCAAAGAAACTCTAAGATTATACCCGCCAACACCATTGCTATTACCTCATGGGGCATCATCGGATTGCAACATCAATGGCTACTTTGTGCCAAAAGGTGCAGACGTGTTTCTAAATGTGTGGAAGCTACATAGAGATCCAAGCATTTGGTCGGAGCCGGAGAGGTTTTCACCGGAGAGGTTCATTAATGGGGATGGAGAAGTTGATAATGAAGGACACCATTTTGAGTATATTCCTTTTGGGTTAGGGAGAAGGGCTTGCCCTGGATACACATTGGCCACACAAGTGATTCTTATAACAATTGCACGTTTGCTTCAAGCTTTTGATTTTGATTTGTTTATGGATGAACCAGTTGATATGACAGAAGGTTTTAGCTTAACCTTGTCCATGTTAAATCCATTACAAATTTGTCTCACCCCACTGGTTAACGCTGAACTCTATGAGTAA 1371 0.4165 MADKYGPIFQIYFGSLPAIVVSNKEGIKECFTTNDKVLASRTPSSRGTHLAYNNASFGFAPYGPYWAKQRKLAVLELLSSRGLESLRHVFESEIDTLIKDLLIHSSLGNKAVVMSEWFERLTFNIITKMVAGKRYFSYLEDVDDLEAHKVVNLIKEFMQLAGGFVLSDAIPLLRWIGVEGRVLKSMKRIGTDLDTLIGGWVEEHKMKGNMVNSSSDDENKDFIHVLLSIVEDDPESGHSRDTIIKAHVMNLILAGTETTSTTMTWILAVLMNNNHSLKKAQQEISLHVGKDRKVEASDLKNLTYLQAIFKETLRLYPPTPLLLPHGASSDCNINGYFVPKGADVFLNVWKLHRDPSIWSEPERFSPERFINGDGEVDNEGHHFEYIPFGLGRRACPGYTLATQVILITIARLLQAFDFDLFMDEPVDMTEGFSLTLSMLNPLQICLTPLVNAELYE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60541g00009 456 PANTHER CYTOCHROME P450 82C3-RELATED 1 455 - -
Stsc60541g00009 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Stsc60541g00009 456 FunFam Cytochrome P450 82C4 1 447 - -
Stsc60541g00009 456 Gene3D Cytochrome P450 1 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS E-class P450 group I signature 2 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS E-class P450 group I signature 263 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS E-class P450 group I signature 306 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS E-class P450 group I signature 243 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS E-class P450 group I signature 121 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS E-class P450 group I signature 347 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 Pfam Cytochrome P450 2 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS P450 superfamily signature 386 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS P450 superfamily signature 254 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 PRINTS P450 superfamily signature 307 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00009 456 SUPERFAMILY Cytochrome P450 1 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60541g00009 Stsc-Chr60541 65900 68238 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60541g00009 1 455 Cytochrome P450 AT4G31940 45.376 1.08e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60541g00009 - - adu:107464642 808.52