Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60541g00006 ATGGCTTTGGATACTACTTATTGTCTCCGAATTCTTGCTGCCATTTTAGCTTTGTCATTCTCATACTTCATCTTAAGGTCCATTAGATCACACAGTAATAGATCCCAAAAAAGAAATGTCAAAACCAAAGTTCCTGAAATACCAGGTGGTTTACCCATCGTAGGTCACCTCCATCTTCTCAATGACAAAATCCCTTATTTTAGAACCTTCTCAGACATGGCTGAAAAATACGGCTCAATCTTCGCTCTTCGCCTCGGCTGCCACCCCACAATCATGGTGAGCAGTGCAGAGCTCGCCAAGGAATGCCTCACAACTAAAGACAGAGTCTTTGCCTCACGGCCGGACACGGCCGCAGGCAGATTCATGGGCTATGACAATGCCGTTTTTGGTCTCGCGCCATACGGACCGTACTGGCGCAAGATCAGAAAAACCGCAATGCTCGAGCTTCTCTCGAGCTACAGGCTTGAGAAGCTGAAACACATCAGAGACAGAGAAATTTATTCTCTTATGAAAGATTTGTTCAGTTTTAGTAACTCGAATGATTTAGTCAGTATAAGTAATTTGTTAGAGCACATGGCATTTAACATTAATGTGCAGATGATAGCAGGGAAAAGGTTCAGTGATGAAGCAATTAATGAAGAAGATAGTGAAGGATGGAGATTAAGGAAAGCAGTTAAAGATGCTACTTATCTTAGTGGTGTTTTTGTGGTAGCTGATGCTATTCCATGGCTTGGTTGGTTTGATTTTCAAGGTTATGTGGGTTTTATGAAGAGAACTGCTAAGGAATTGGACTCTATTCTTCATAGGTGGATGGTTGAACATATAGAAAAAAGAGGTGAATCTGAGCATGATTTCTTGGATGTTCTGATTTCTGCATTTGAAGAAAATGATGAGATTTATGGCCATAAGAGGGACATAGTTCTCAAAGCAACAGCACTGATGCTAGTCCTAACTGGATCAGGAAGCACAGCCATAACATTAGCATGGTCACTATCCTTACTCTTAAACCACCCAACTGCCATGAATGCTGCCAAACAAGAGTTAGATACCATCGTTGGAAAACACAAATGGGTCCAAGAATCACACATCAAAGACCTCAAATATCTCCAAGCCATTGTCAAAGAGACTCTTCGCCTGTACCCACCCGCACCCTTAACCGGAATAAGGGAAGCCACCGAAGACTGCTATCTAAACGATTACCATGTCTCAAAGGGCACTCGCTTGTTCATCAATCTATGGAAGCTCCATAGGGATCCCAAAACATGGTCTAACCCTAACGATTTTGAGCCTGAGAGGTTCCTTAACGCTTGTTCGGGGATTGATTTTCGCGGTCAGGACTTCGAGTTTCTCCCATTTAGCTCAGGACGAAGGTCGTGCCCCGGCAGGACCTTTGGAATGCAAGTTGTGCATCTGACATTGGCGAGGTTGATTCAAGGTTTTGATATGTCAACTAAAGATGGTGGTCAAGTTGATATGAGTGAAGGGTTGGGTGTGGCCTTGCCTAAGAAAAACGCACTTGATATTCTTCTCAAACCCCGTCTTCCTTTGGAGCTATATGAAGGCCTTTGA 1569 0.4334 MALDTTYCLRILAAILALSFSYFILRSIRSHSNRSQKRNVKTKVPEIPGGLPIVGHLHLLNDKIPYFRTFSDMAEKYGSIFALRLGCHPTIMVSSAELAKECLTTKDRVFASRPDTAAGRFMGYDNAVFGLAPYGPYWRKIRKTAMLELLSSYRLEKLKHIRDREIYSLMKDLFSFSNSNDLVSISNLLEHMAFNINVQMIAGKRFSDEAINEEDSEGWRLRKAVKDATYLSGVFVVADAIPWLGWFDFQGYVGFMKRTAKELDSILHRWMVEHIEKRGESEHDFLDVLISAFEENDEIYGHKRDIVLKATALMLVLTGSGSTAITLAWSLSLLLNHPTAMNAAKQELDTIVGKHKWVQESHIKDLKYLQAIVKETLRLYPPAPLTGIREATEDCYLNDYHVSKGTRLFINLWKLHRDPKTWSNPNDFEPERFLNACSGIDFRGQDFEFLPFSSGRRSCPGRTFGMQVVHLTLARLIQGFDMSTKDGGQVDMSEGLGVALPKKNALDILLKPRLPLELYEGL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60541g00006 522 Gene3D Cytochrome P450 29 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 FunFam Cytochrome P450 82C4 34 511 - -
Stsc60541g00006 522 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 SUPERFAMILY Cytochrome P450 48 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 PANTHER CYTOCHROME P450 82C3-RELATED 18 519 - -
Stsc60541g00006 522 Pfam Cytochrome P450 45 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60541g00006 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60541g00006 Stsc-Chr60541 37484 39722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60541g00006 45 519 Cytochrome P450 AT4G31970 47.143 6.34e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60541g00006 K17961 - gmx:100806378 696.041