Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60540g00005 ATGAAGAAGACATCAGCTACTATTGAATTTCATGAGGAGAATAATGATGAAGGAGCAGGATGCATGTGGGGCATGCCTAACATTCTTGATTACCATCATTGGCTTAATATCAGAAATGTGTTCCCCCTCAAAAGGCACCATTACCCTGCAACACTTGCCACATATAAGAGAATAAGCATTTTGCATAGCCATTGGGGAGACCAACAAATTGGTGATGAAGAAGCAGAACCCCTCTTGGTTAGGCAACATGAACAAAAGTGCAGTGCTAAAGGAAAAAGTGCTTCCAATATCAGAAATAGAAGAACACAAAGTGAACATATGGAAACAAAGAAGCTTAATAGAGATACTCCCATTAACTCTAAGAGGCATTCTGATTCTTTGGAGGTACTTGGAGTGGAGAAGGATTTGATGTTAAAATTTTTACATGATCTTAATGTTGGTGGCGAAAATTTTCAACTTCAAATGGCTTTCAATAACAAAGCAAGTTTGGAAAAATCAGGTTCAGTTCCTCAGACATCACAGATGAGAAGCACTACTAGTCCTACCACCTTGGAACACAAGCAAACCGAGATTCGGCCCTGCCACAAGAAGAACAAGTTGCTTCATAGTACTCAAGCACAAAAGACCTTTGCATCTGTTAAAAAAAAACAAAGATTTTCTTCCTCTTCAAGTAATCCTCCAGGTTTGAATCTCAGAGGGTGGAACCAATTGGTTCTTTATAGTTTCAAGGTTATTAAGCAGAAGATTAAACATGCTCTTATGGAATTCAAGAAAAGTGGCTATCAAACTTCTGCTGAAGGTATCCACCAGCATAATGAGAATGAAATCTCAGATGAGAGTAAAGACTTTTGTTATGATTCCATCAGACGAGAATTTCACAGCTGCAGGAGAAGAGAATCCTCTCTTCATGAGTGTCTTGATAGATACACTCAATTGTTTGAGAAAAGCTTTGGCAAAGACATCAAGTGTCATGGATCAACGTCTAGAAGCTTAAAATTGCCAAATGAGGATAAGAATAATAGCACGAATTTGTGTCGGTATCCTCCTAAGGCTTCTAGAAGGAATTTATCTCTGCCTAATCTTGATTCTTTCAGCTTCTTGATTCTACATGAGGCACTTTCTGATGCAAATGATGTGAATGCTGTTCCTTTATCTGACAAAACTATTGAGAGAAACAATGGGGAAATCCCCTTTGGAGTTAGCAACCGACCACACCAAGATGATATATCATTGGACACTCATGAGCCAGCTTTAGAAGATGGAAGTTTTCCCCAAGAACAAGAACAAGTGCAAATAATTATGGCCAAGGAAGCCATAGTAACACTTGAAACCAGTGATATAGAAGGTAGAGAACTAAATGCAACTGCAGAAGGCACAGGAATTAAATCAGATGATGAAGAAATTGATTCCAATTTCAAACATGTCAAACATGTTCTTGAGTATCTAGGCCTCATGGGAAATGAGGACAACATTGTTCAACTGTGGCACACATTAGATCAGCAACTAATTGATACATCTTGGTTTCATGTAATTGAATCCATTGGAGAAGATAGTGTCATATCCAATCATCATCATCATCATCATCATCATCATGACCTTCTTGTTTCTAACATAGTAAAAGAGGTGCTGCTCCAAATACATGAGACATCATCAACTTACTCCACAATAATTCATAAGGGGCAACATCTTCTTAATGAAGTATGGATTAGAGTGAACTCATACCTGAGATTGAGGCCAGAGCTAGATCAGACATTAGATGATGTTGTTGGTCGAGATTTGGCCAAGAAAAATGGCTGCTGGATGATCCTCAAGCATGAAGAGGAGTGTGTAGCACTTGAACTAGAAGAGATTATTTTCAAAGATTTAGTGGATGAAATAATCTTCATATGA 1890 0.382 MKKTSATIEFHEENNDEGAGCMWGMPNILDYHHWLNIRNVFPLKRHHYPATLATYKRISILHSHWGDQQIGDEEAEPLLVRQHEQKCSAKGKSASNIRNRRTQSEHMETKKLNRDTPINSKRHSDSLEVLGVEKDLMLKFLHDLNVGGENFQLQMAFNNKASLEKSGSVPQTSQMRSTTSPTTLEHKQTEIRPCHKKNKLLHSTQAQKTFASVKKKQRFSSSSSNPPGLNLRGWNQLVLYSFKVIKQKIKHALMEFKKSGYQTSAEGIHQHNENEISDESKDFCYDSIRREFHSCRRRESSLHECLDRYTQLFEKSFGKDIKCHGSTSRSLKLPNEDKNNSTNLCRYPPKASRRNLSLPNLDSFSFLILHEALSDANDVNAVPLSDKTIERNNGEIPFGVSNRPHQDDISLDTHEPALEDGSFPQEQEQVQIIMAKEAIVTLETSDIEGRELNATAEGTGIKSDDEEIDSNFKHVKHVLEYLGLMGNEDNIVQLWHTLDQQLIDTSWFHVIESIGEDSVISNHHHHHHHHHDLLVSNIVKEVLLQIHETSSTYSTIIHKGQHLLNEVWIRVNSYLRLRPELDQTLDDVVGRDLAKKNGCWMILKHEEECVALELEEIIFKDLVDEIIFI 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60540g00005 629 PANTHER PROTEIN TRM32 12 110 IPR044257 -
Stsc60540g00005 629 MobiDBLite consensus disorder prediction 99 120 - -
Stsc60540g00005 629 MobiDBLite consensus disorder prediction 163 198 - -
Stsc60540g00005 629 MobiDBLite consensus disorder prediction 86 120 - -
Stsc60540g00005 629 Pfam Domain of unknown function (DUF4378) 472 625 IPR025486 -
Stsc60540g00005 629 MobiDBLite consensus disorder prediction 163 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60540g00005 Stsc-Chr60540 27362 29645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60540g00005 116 619 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 26.527 1.78e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60540g00005 - - aip:107629102 882.478