Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60539g00012 ATGGAAGGATCGAGTTCAGATCCATCAGTGGATTTGTTTTCGGATAATTCTTGTGATTTAAGCAACACAGAACAGTTTTCTTGTGATGTTGATGAGGATTATGTTCCAAAAGTTGGCATGTTTTTTGAGTCACTTGAGAAAGCTAGGAATTTCTACAGGGATTATGCTAAACGGGCAGGGTTTACTATAAAAATTAGGAACACAAATAAGTGCAAGAAATCAAACGAAATATTGAACCAGCTGCTGTCATGTAATAGAGAAGGGAAAAGAAGGTCGGATGTGCTAGTTTTTAAGAAGACTAATGCAGTATATGCTACTAATTGTCCAGCCAGAATCTGTGTCCATCATATGAAGTATTTTGATTTCTGGCAGATTTCGAAAGTAGTTTTAGAACATTCACATCCATGCTCCAAATCATGCATCAATGTTTCCTCAATACCGAGAGCTCAACATGCATGTCCGCCGTACAATTGA 474 0.3755 MEGSSSDPSVDLFSDNSCDLSNTEQFSCDVDEDYVPKVGMFFESLEKARNFYRDYAKRAGFTIKIRNTNKCKKSNEILNQLLSCNREGKRRSDVLVFKKTNAVYATNCPARICVHHMKYFDFWQISKVVLEHSHPCSKSCINVSSIPRAQHACPPYN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60539g00012 157 Coils Coil 156 157 - -
Stsc60539g00012 157 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 136 - -
Stsc60539g00012 157 Pfam FAR1 DNA-binding domain 50 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60539g00012 Stsc-Chr60539 64103 64942 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc60539g00012 FAR1 3.9e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60539g00012 - - aip:110271906 125.561