Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60539g00001 ATGGGGTACCTCAATTCGGTTTTGTCATCTTCAAGTCAGGTTCATGCAGCAGAAGATTCACCTGTCAGTGGTGGAGGACTCAGTCAGAATGGAAAATTCAGCTATGGGTATGCTAGCTCTCCGGGCAAGAGATCCTCTATGGAAGATTTTTATGAGACGAGAATTGATGGTGTGGATGGTGAAATAGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGCGGTGCTCGTGCTGCTGAGTACGTCAAACAACACCTATTTAGTAATTTGATCAAACATCCAAAATTCATTTCTGACACCAAATCTGCAATAGCTGATGCATATAACCACACCGACGCTGAATTTCTGAAATCAGAAAATAACCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTAGTTGGTGACCGTTTGCTCGTTGCTAATGTCGGGGACTCTAGGGCTGTTATATGCAGGGGTGGAAATGCTATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAAATGCTGGGGGCTTTGTTATGTGGGCTGGAACCTGGAGAGTAGGTGGCGTTCTTGCTGTTTCTCGTGCTTTCGGTGATAGACTCCTGAAACAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAGTTGATAGCTCTCTTGAGTTTCTTATCTTGGCCAGTGACGGGCTATGGGATGTTGTCTCCAACGAGGAAGCTGTTGCGATGATAAAGAAAATAGATGATCCAGAGGAGGCGGCAAAGAAGTTGATGCAAGAAGCATATCAGAGAGGTAGCTCTGACAACATTACTTGTGTTGTTGTTCGTTTCTTGACGAACCAAGTCGCTTCTTCTCGTACTAACTCCGGCTAA 882 0.4467 MGYLNSVLSSSSQVHAAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQHLFSNLIKHPKFISDTKSAIADAYNHTDAEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKKIDDPEEAAKKLMQEAYQRGSSDNITCVVVRFLTNQVASSRTNSG 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60539g00001 293 FunFam probable protein phosphatase 2C 59 26 284 - -
Stsc60539g00001 293 SMART PP2C_4 24 278 IPR001932 -
Stsc60539g00001 293 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Stsc60539g00001 293 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Stsc60539g00001 293 CDD PP2Cc 33 280 IPR001932 -
Stsc60539g00001 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Stsc60539g00001 293 SMART PP2C_SIG_2 45 280 IPR001932 -
Stsc60539g00001 293 Gene3D - 26 288 IPR036457 -
Stsc60539g00001 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Stsc60539g00001 293 PANTHER PROTEIN PHOSPHATASE 26 279 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60539g00001 Stsc-Chr60539 3865 8653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60539g00001 1 291 PP2C-type Phosphatase Gene Family AT4G31750 89.796 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60539g00001 K17506 - gmx:100795017 553.518