Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60536g00014 ATGGATTACTATTATGTGAACCCAATAAGCCCCAATTATTACGGTGCTCATGATGATGATGATGACTCTGCCATGAATAGCATGTCTTTCATGATATCCGATTTTCTTATGGCTGATGATGATGATCATCATAGTAATCAAGATCATCAGTGTGGATCACAATCACAAAGTACTACTGAATCATCAGTAAAGATGGCAGCGTTCAGCGATGTCACTACTACTACTACTACTACTACTACTCAAGCTCACCGATTCAATAATAATAACAACAATGGTGAAGCCTCCAGTAACAACAATAACGTCATAAAATGCAAGAATGGAAGCAATAAGAGAAGTAAGGGAGAAGTGAATTCATCAAGAGTGGCGTTTAGAACGAAATCGGAGCTTGATGTTATGGATGATGGTTATAAATGGAGGAAGTACGGTAAAAAGTCTGTCAAGAACACTCCATATCTAAGGAACTATTACAAGTGTTCAAGTGAAGGATGCAGTGTGAAGAAGAGGGTGGAGAGGGACAGAGACGACTCAAGCTATGTCATAACAACCTATGAAGGCATACATAATCATGCAACCCCATTTACCTACTAA 588 0.3878 MDYYYVNPISPNYYGAHDDDDDSAMNSMSFMISDFLMADDDDHHSNQDHQCGSQSQSTTESSVKMAAFSDVTTTTTTTTTQAHRFNNNNNNGEASSNNNNVIKCKNGSNKRSKGEVNSSRVAFRTKSELDVMDDGYKWRKYGKKSVKNTPYLRNYYKCSSEGCSVKKRVERDRDDSSYVITTYEGIHNHATPFTY 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60536g00014 195 MobiDBLite consensus disorder prediction 41 62 - -
Stsc60536g00014 195 SUPERFAMILY WRKY DNA-binding domain 124 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc60536g00014 195 Pfam WRKY DNA -binding domain 133 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc60536g00014 195 ProSiteProfiles WRKY domain profile. 127 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc60536g00014 195 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 192 IPR044810 GO:0003700
Stsc60536g00014 195 MobiDBLite consensus disorder prediction 77 100 - -
Stsc60536g00014 195 FunFam WRKY transcription factor 57 118 192 - -
Stsc60536g00014 195 SMART WRKY_cls 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc60536g00014 195 Gene3D WRKY domain 116 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60536g00014 Stsc-Chr60536 56193 57395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60536g00014 120 191 WRKY Transcription Factor Family AT5G64810 80.556 7.33e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc60536g00014 WRKY 1.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60536g00014 - - gmx:100500248 183.726