Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60534g00011 ATGGCATCAATCGTCGCGGCAGAGGGCGTGCCGGCACCGTATAACTCTACGGTGGCGACTCGGCTAGGCCGGAGAAGAATTCCGATCCACACCACGTTCTATTGGGACCACAAGGTAGACATACTTTTCCGGTGCTGGCCGGGTGACAGCGTGGGCATGTACGTGGTGGCGCTGATGCTGGTGTTCGCGATGGCGGTGCTGGTGGAGTGGCTTTCCTTCACCAAAATTGTGAAGCTGAAGCCAGGGGGCTCAAACGACATCGTTGGGGGACTATTGAAGACGGGGCTATACGGCGTTCGTTCGGGTCTGTCTTACATGGTGATGCTGGCCGTTATGTCGTTTAACGGCGGGGTTTTTATTGTCGCAATTGGGGGCCACGTCATCGGGTTCTTGATTTTCGGTACTCGTGCGTTTAGGAGGAAGACGCCTCTACCGGATTCGTCTAATAAGACTTTGGATTTGCGAGTTCGGTAG 474 0.5506 MASIVAAEGVPAPYNSTVATRLGRRRIPIHTTFYWDHKVDILFRCWPGDSVGMYVVALMLVFAMAVLVEWLSFTKIVKLKPGGSNDIVGGLLKTGLYGVRSGLSYMVMLAVMSFNGGVFIVAIGGHVIGFLIFGTRAFRRKTPLPDSSNKTLDLRVR 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60534g00011 157 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 29 140 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc60534g00011 157 Pfam Ctr copper transporter family 91 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc60534g00011 157 Pfam Ctr copper transporter family 32 75 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60534g00011 Stsc-Chr60534 69183 69830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60534g00011 32 142 Inorganic Solute Cotransporters AT5G59030 47.748 2.33e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60534g00011 K14686 - gmx:100803410 252.677