Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60533g00022 ATGAAGTGTGATGTGACTGCGAGAGCACGGCAGTGGGAAAGGGAATGGAGGCAAAAAAGGGTCACAAGAGGTGGGTTCAACATGCCCAATAGCAAGAACTCTACTGAATTAGTGTACATAGGAGTGGGTGAAAATGAAGATGTGCAGGCTTTCTACTATTTCATTGAGTCAGAGAACAATCCTAAGGTGGATCCTCTCATGCTGTGGCTCACTGGTGGTCTTGGCTGCTCTGCTTTCTCTGGCCTTGTCTTTGAAATAGTTCCAATTGCATTTAAAATTGAGGAATACAATGGGAGGCTGCCTAATTTGGTCTTGAGGCCACAATCATGGACAAAAGTAAGTAGCATTATATTTGTAGACTTGCCAGTAAATACAGGCTTCTCATATGCCAGAACAGAATCTGCATCTCACAGGACCGATTGGTCATTAGTTCACCAAACCCATCAATTTCTTAGGAAGTGGCTAATTGAGCATCCAGAATTTCTCACAAATGAATTTTACGTTGGTGGTGATTCATACTCCGGAATTCCGATTCCTGTAATTACTCACGAAATTTCTCAAGGTACAAACATCATCCAGGGATACCTGCTGGGGAATCCTGTAACAACCCGAACTGAAAAAAACCATGAAATCCCATTTTCTCATGGAATGGCTCTTATTTCTGATGAGCTATACCAGTCATTGCAAAAAAATTGCAGAGGAGAATTTACAAATGTAGACATTGCAAACGTGTTATGTACCCAAGATCTAGAGTCTTATGATGATAACGTATCAGGACTTTATACAGGCCATACTTTGGATGCAAAATGTGAGTTTGGTTCACCAAAGCCATTGGATGTTCCTTGGAAGAGATCTCTGATTGATAACTATTCTTCAGAGTCTAACAATAATCGACTCGCATTGCCAGCTATAACTTGTCGGACTTTTGCATACTTCCTCAGTAGTTATTGGGCTAATGATGGCAAGGTTCGCAATGCCCTGGGCATGCGTAAGGGAACGAAAGCAACATGGCAACGTTGTACCTACGATATACCAAACAAGGAGGATATCCCTGGAAGCTTTCCATATCATGTAAAGCTCAGTAAAAAAGGTTACCGTGCACTGATATACAGGTAA 1116 0.4167 MKCDVTARARQWEREWRQKRVTRGGFNMPNSKNSTELVYIGVGENEDVQAFYYFIESENNPKVDPLMLWLTGGLGCSAFSGLVFEIVPIAFKIEEYNGRLPNLVLRPQSWTKVSSIIFVDLPVNTGFSYARTESASHRTDWSLVHQTHQFLRKWLIEHPEFLTNEFYVGGDSYSGIPIPVITHEISQGTNIIQGYLLGNPVTTRTEKNHEIPFSHGMALISDELYQSLQKNCRGEFTNVDIANVLCTQDLESYDDNVSGLYTGHTLDAKCEFGSPKPLDVPWKRSLIDNYSSESNNNRLALPAITCRTFAYFLSSYWANDGKVRNALGMRKGTKATWQRCTYDIPNKEDIPGSFPYHVKLSKKGYRALIYR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60533g00022 371 FunFam Serine carboxypeptidase-like 19 25 276 - -
Stsc60533g00022 371 Pfam Serine carboxypeptidase 39 370 IPR001563 GO:0004185|GO:0006508
Stsc60533g00022 371 SUPERFAMILY alpha/beta-Hydrolases 39 370 IPR029058 -
Stsc60533g00022 371 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 360 IPR001563 GO:0004185|GO:0006508
Stsc60533g00022 371 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 129 IPR001563 GO:0004185|GO:0006508
Stsc60533g00022 371 PRINTS Carboxypeptidase C serine protease (S10) family signature 106 118 IPR001563 GO:0004185|GO:0006508
Stsc60533g00022 371 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 179 IPR001563 GO:0004185|GO:0006508
Stsc60533g00022 371 Gene3D alpha/beta hydrolase 18 371 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60533g00022 Stsc-Chr60533 101311 103931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60533g00022 313 370 Calmodulin-binding Proteins AT2G22960 50.000 1.67e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60533g00022 K16296 - gmx:100792006 459.914