Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60533g00021 ATGGCAACTTGTCACATGTTCCATACCTTGCTAATTCCCATTCTTATATTATCACTACAACATGCTAACTGTGGCAACATAGTGAAGTACCTTCCTGGGTTTGAAGGACCCCTTCCTTTTCTGCTTGAAACTGGGTACGTAGGAGTGGGGGAGAATGATGATGTACAAACTTTCTACTACTTCATTGAGTCAGAGAACAATCCAAGGGAGGATCCTCTCATGCTATGGCTCACTGGTGGTCCTGGCTGCTCTGCTTTCTCTGGCCTTGTTTTTGAAATAGGACCACTTGAATTTCAATATGATGAATATAATGGAGGACTCCCTACTTTGGTGTATAGACCATACTCGTGGACTAAGGCAAGTAGCATTGTATTTGTAGATATGCCTGTTAATAGCGGCTTTTCATATGCTACAACAGAATTTGCTTCTCGACGGAGCGATTGGTTGTCAGTCAATCAAACCTATCAATTTTTTAGGAAGTGGTTAATGGATCATCCAGCATTTCTCACAAACAAAGTTTACATTGGTGGTGATTCATACTGTGGTCTTCTTATTCCAACAATTACTCACGAAATTTCAAAAGGAATTGAACAAGGCCTCCAACCATGGATAAATCTCCAGGGATACCTGATGGGCAATCCTAAAGTAGATCAAAAAGAAGAAAACTATAAAATCCAATTTGCTCATGGGATGGGACTCATTTCTGATGAACTATACCAGATCACATCAGATCTTAAACAAGGCAACATTTTGGAGCCATCATGTGCACCCGACTCACAGAAGCCATTGGAATCTTCTCGGAGGATATCATTAACAGAGATCTATCCTTGGAAGTTCAATGATACTCATCTCAGATTACAACCAAGAGTTTGTCGGGATGATATATATCCCCTTAGTGAGTATTGGGCCAATAATGACACAGTCCGCGATGCGCTTAAAGTGAGGAAGGGAACTAAAGAGATATGGCAACGCTGCACCAGAGATGTGCCTTACAAGAAAGATATCCCTAGCAGCATTCCATATATCCTAAATCTCGGCAAGAAAGGCTATCGTTCACTGATTTACAGTGGAGATCATGACATGAATATTACTTTCGTGTCAACTAAAGCGTGGATAAGATCGTTAAACTACTCCATTGTTGATGATTGGAGGCCATGGTATACTAATGGCCAAGTTGCAGGATACACAAGGACTTACTCCAATGCAATGACATTTGCAACTGTGAAGGCTGCAGGACACACAGCACCAGAGTACAAGCCTCAAGAATGCTTACACATGTACACTAATTGGATCTCTGAGAGGCCTGTTTAG 1311 0.4142 MATCHMFHTLLIPILILSLQHANCGNIVKYLPGFEGPLPFLLETGYVGVGENDDVQTFYYFIESENNPREDPLMLWLTGGPGCSAFSGLVFEIGPLEFQYDEYNGGLPTLVYRPYSWTKASSIVFVDMPVNSGFSYATTEFASRRSDWLSVNQTYQFFRKWLMDHPAFLTNKVYIGGDSYCGLLIPTITHEISKGIEQGLQPWINLQGYLMGNPKVDQKEENYKIQFAHGMGLISDELYQITSDLKQGNILEPSCAPDSQKPLESSRRISLTEIYPWKFNDTHLRLQPRVCRDDIYPLSEYWANNDTVRDALKVRKGTKEIWQRCTRDVPYKKDIPSSIPYILNLGKKGYRSLIYSGDHDMNITFVSTKAWIRSLNYSIVDDWRPWYTNGQVAGYTRTYSNAMTFATVKAAGHTAPEYKPQECLHMYTNWISERPV 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60533g00021 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Stsc60533g00021 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Stsc60533g00021 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Stsc60533g00021 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 403 416 IPR001563 GO:0004185|GO:0006508
Stsc60533g00021 436 Gene3D alpha/beta hydrolase 38 435 IPR029058 -
Stsc60533g00021 436 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 420 IPR001563 GO:0004185|GO:0006508
Stsc60533g00021 436 Pfam Serine carboxypeptidase 32 432 IPR001563 GO:0004185|GO:0006508
Stsc60533g00021 436 SUPERFAMILY alpha/beta-Hydrolases 28 434 IPR029058 -
Stsc60533g00021 436 FunFam Serine carboxypeptidase-like 19 21 274 - -
Stsc60533g00021 436 FunFam Carboxypeptidase 338 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60533g00021 Stsc-Chr60533 90606 93709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60533g00021 20 51 Calmodulin-binding Proteins AT2G22960 68.750 2.61e-09 54.7