Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60533g00011 ATGGTGGTCGAAGATACCCAGAAATCAAGCATCACCGACGACCAAATCACCGCAAACCCTAACAACGAAAACGAAGACCTTGAGGAGGGAGAGATCCTCGACGACGACGATTCCTCCGCCACCTCCAGGCCACCCTCCTCATCCGCTTGGGGCAGCTCCATCAGACCCATTTACACCTTCGCCACCGTTGAAGAATTCTGGAGCATTTACAATAACATACATCACCCTAGCAAGTTGGCTGTTGGAGCTGACTTTCACTGTTTCAAGCACAAGATTGAGCCTAAATGGGAGGACCCTATCTGCGCTAATGGGGGAAAATGGACTATGACATTTCCTAGGGGGAAATCTGATACCAGTTGGTTATACACGTTGTTGGCAATGATTGGAGAACAATTTGATCATGGTGATGAGATTTGTGGAGCTGTTGTGAATGTCAGGAATAGGCAGGAGAAAATTGCTCTTTGGACTAAGAATGCTGCAAATGAAGCTGCTCAGGTGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTATAATGATACCATCGGCTTTATATTCCATGAGGATGCAAAGAAGCATGACAGAGCCGCTAAAAACAAATACACGATATGA 612 0.4592 MVVEDTQKSSITDDQITANPNNENEDLEEGEILDDDDSSATSRPPSSSAWGSSIRPIYTFATVEEFWSIYNNIHHPSKLAVGADFHCFKHKIEPKWEDPICANGGKWTMTFPRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRNRQEKIALWTKNAANEAAQVSIGKQWKEFLDYNDTIGFIFHEDAKKHDRAAKNKYTI 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60533g00011 203 SUPERFAMILY eIF4e-like 43 198 IPR023398 -
Stsc60533g00011 203 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 35 193 IPR001040 GO:0003723|GO:0003743|GO:0006413
Stsc60533g00011 203 MobiDBLite consensus disorder prediction 1 50 - -
Stsc60533g00011 203 Gene3D RNA Cap, Translation Initiation Factor Eif4e 24 203 IPR023398 -
Stsc60533g00011 203 MobiDBLite consensus disorder prediction 1 23 - -
Stsc60533g00011 203 FunFam Eukaryotic translation initiation factor 4E 32 203 - -
Stsc60533g00011 203 Pfam Eukaryotic initiation factor 4E 43 180 IPR001040 GO:0003723|GO:0003743|GO:0006413
Stsc60533g00011 203 ProSitePatterns Eukaryotic initiation factor 4E signature. 84 107 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60533g00011 Stsc-Chr60533 50262 52016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60533g00011 48 202 Eukaryotic Initiation Factors Gene Family AT4G18040 81.290 1.91e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60533g00011 K03259 - gmx:100793288 325.479