Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60532g00014 ATGGAGGATGCTGATGGTGTCATTAGGGAGCATCGTATAAAGGCAATATTAGAAGTTCTCCAGAGAGGGCTTCGATCTGCCAATAAGCTAAAACAAATTGTCAACAATAATGGAGATCGCCAAGATGACGATAATGAGTCATCACCACGTAATCATCTCATCAATGAAATTATCTCCTCCTTCGACCAGGGCATCTTTCTCTTGACCAAATATCCTATTCATCACCAATCTTCTTCTTCTTCCCACCACGGTCTCCCTCCGGACAAAAGAGACTCTTGCCAGAGAAAGATAAACATGGAAACATGGAAGAAGGAGTCGGAGAAGGAAAGAGAGGAGGACGGGCATCAATGGAGGAAGTACGGACATAAGGAAATCCAAGATGAGAAATACCCAAGGAACTACTTCCGCTGTACTCACAAGCATTAA 426 0.4343 MEDADGVIREHRIKAILEVLQRGLRSANKLKQIVNNNGDRQDDDNESSPRNHLINEIISSFDQGIFLLTKYPIHHQSSSSSHHGLPPDKRDSCQRKINMETWKKESEKEREEDGHQWRKYGHKEIQDEKYPRNYFRCTHKH 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60532g00014 141 MobiDBLite consensus disorder prediction 84 124 - -
Stsc60532g00014 141 ProSiteProfiles WRKY domain profile. 106 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc60532g00014 141 SUPERFAMILY WRKY DNA-binding domain 108 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc60532g00014 141 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 140 IPR044810 GO:0003700
Stsc60532g00014 141 SMART WRKY_cls 111 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc60532g00014 141 Gene3D WRKY domain 96 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc60532g00014 141 MobiDBLite consensus disorder prediction 75 124 - -
Stsc60532g00014 141 Pfam WRKY DNA -binding domain 112 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60532g00014 Stsc-Chr60532 87793 88558 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60532g00014 14 139 WRKY Transcription Factor Family AT1G66600 34.091 5.33e-13 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc60532g00014 WRKY 5.3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60532g00014 - - adu:107473290 129.413