Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60532g00011 ATGGAGGACGATGATGATGGTGTCGTTAGAGAGGATCTTGTAAAGGCAATAATAGAGGAAGAGCTTCTGAGAGGGCATGAATCAGCCAATCAACTAAAACAACTTCTTGTCAATTGCCAAGATGACAATAATGATGAGTCATCACCACTTAATCATCTTCTCAGCACCATTATCTCCTCCTTCTCCAACACCATCTCCCTCTTGAACAAATATTCTATTCATCATTCTTCTCCTTCTCCTTCTTCTTCCCATCATGTTTGCAAGACCCCTCCGGATAGAAGACGCTCTTACAGGAGAAAAAGAAACATGGAAACGTGGAAGAGAGAGTCAGAGAAGGAAAGAGAGGAGGATGGGCATCAATGGAGGAAGTACGGACAGAAGGAAATCCAAGATGAGAAATACCCAAGGAATTACTTCCGGTGTACTCACAAGTATGGAAAGGGATGTCCAGCAACCAAACAAGTGCAGAGGATTCAAGACAAGCCTCCATTGTACAGGACCACCTATTATGGCCGCCATACCTGCACCAACACAGACACTAGCAACATACACTTAATGGAGGAACATGACCCTACCCTTTCACCTTCTTCCTCTTTATTCCTCAGCTTTGACAACTCCATCCCCAATCCAACAACCAATCCCATTTTCTCAACACCGCCACCACTACCACATGAGATGATGATACAGGAGGAGGATTTCAATAATTACAATAATAACAAGGAGGAGGAGGATTTGTCAAGCCATGATGTAGCCATGTTATCATTATCAGACAATCATAGTGATAATTGCTTGGAAGCGATGATGGACATATCTCAATTCTTAAACATTTCTGTGTGCTATGATGAGCAATAA 852 0.4249 MEDDDDGVVREDLVKAIIEEELLRGHESANQLKQLLVNCQDDNNDESSPLNHLLSTIISSFSNTISLLNKYSIHHSSPSPSSSHHVCKTPPDRRRSYRRKRNMETWKRESEKEREEDGHQWRKYGQKEIQDEKYPRNYFRCTHKYGKGCPATKQVQRIQDKPPLYRTTYYGRHTCTNTDTSNIHLMEEHDPTLSPSSSLFLSFDNSIPNPTTNPIFSTPPPLPHEMMIQEEDFNNYNNNKEEEDLSSHDVAMLSLSDNHSDNCLEAMMDISQFLNISVCYDEQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60532g00011 283 ProSiteProfiles WRKY domain profile. 110 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc60532g00011 283 MobiDBLite consensus disorder prediction 97 122 - -
Stsc60532g00011 283 Gene3D WRKY domain 100 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc60532g00011 283 SMART WRKY_cls 115 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc60532g00011 283 Pfam WRKY DNA -binding domain 116 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc60532g00011 283 SUPERFAMILY WRKY DNA-binding domain 112 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc60532g00011 283 MobiDBLite consensus disorder prediction 73 122 - -
Stsc60532g00011 283 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 188 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60532g00011 Stsc-Chr60532 69695 70735 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60532g00011 15 190 WRKY Transcription Factor Family AT3G56400 37.056 6.16e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc60532g00011 WRKY 9.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60532g00011 - - adu:107473290 274.633