LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc60529g00001	ATGGCTAGTGGATGGGTGAAATCGTTGCATTGCAAGTCAAGAGCCTTTGAAGATGTTTACCATCCTACCCCTAGCAAAATCTTGATTCCCAGTGCTAGCTGCAGGAGAAGCTTCCAGACAATTAAAGACATGGTTGATTTGCCAAAGCCCGTTTCCAGGCCCAAGCCCATGCCTAAGCCCATGCCGAGAAAGAATAAGAATGGTAGTAGTCTTCTTGAGAAGCATCCTAGTTCGAGATACCCGGCGTCATCCAAGCCCGAATTGAATGCCGCTTTGGGCTCCAAGGCTTCCATGAACCGCTCGCAGAGCCTTGCTGCCACGTCAGCAAGGCCCGTCATGGAGCTACCCGACGGGCATCCTTCGCGGAACGTGGTAGAGATTATATTTCACACGAGTTGGGGCCCGAAACCGTTCCCGGGCCGCGTGGAGGTCATATTCAAGATCCAGAACGGGGCCCGGACGGTTTCGCGGTTCGAGGAGTTTCGCGAGGGGGTTAAGGCCCGGGCCGCAGCGTGTTCCGTGGGCCTGGTGGGCGAGGAAGGGAGCAACTGGGAAAAGGAGAATGCGCGGTGCGTGGCGGACGGGAATGAGGTTATGCGGTTCCAATGCTTGGGTCCCACGGAGGACGGCGCCGCCGTCGTGTGGTCGTTTCCGGAGAGGAAGGGTTCGGCGATCTGCACGTTCTCCGGTAGCGGTGATGCGCACGAGAGCGCCGGCGGCGGAAGGGGAAGGAGGGCGATGCTGGTTTGCCGGGTCGTTGCGGGTCGGGTCTCGAAGCAACTCGGGATTGGTGACTCGGTTTTGGAGAAGCGAGTTGGGTTTGACTCGGTGAGTGGGGAAAACGGCGAGTTGTTAGTGTTCGACTCGCGTGCCGTGTTGCCCTGTTTTCTTATTTTTTACAGATTGTAA	909	0.571	MASGWVKSLHCKSRAFEDVYHPTPSKILIPSASCRRSFQTIKDMVDLPKPVSRPKPMPKPMPRKNKNGSSLLEKHPSSRYPASSKPELNAALGSKASMNRSQSLAATSARPVMELPDGHPSRNVVEIIFHTSWGPKPFPGRVEVIFKIQNGARTVSRFEEFREGVKARAAACSVGLVGEEGSNWEKENARCVADGNEVMRFQCLGPTEDGAAVVWSFPERKGSAICTFSGSGDAHESAGGGRGRRAMLVCRVVAGRVSKQLGIGDSVLEKRVGFDSVSGENGELLVFDSRAVLPCFLIFYRL	302

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc60529g00001	302	PANTHER	C2H2-LIKE ZINC FINGER PROTEIN	5	300	-	-
	Stsc60529g00001	302	MobiDBLite	consensus disorder prediction	94	108	-	-
	Stsc60529g00001	302	Gene3D	-	111	301	-	-
	Stsc60529g00001	302	MobiDBLite	consensus disorder prediction	44	117	-	-
	Stsc60529g00001	302	SUPERFAMILY	ADP-ribosylation	112	301	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc60529g00001	Stsc-Chr60529	1478	2696	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc60529g00001	112	300	C2H2 Transcription Factor Family	AT2G29660	37.991	1.41e-26	105

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc60529g00001	-		-	gmx:100811674	390.578