Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60525g00013 ATGAGTGCGGCCACAAAATGTGATGTGTATAGTTTTGGAGTGCTGGCTTTAGAAACAATGATGGGTCATCACCCAGGACAACTCGCTTCTACTTTGTCAAAGCCATGCACTCAACAATTATTGGTGAAAGATTTTTTGGATCCTCGGAATCCACTTCCAAATTTTGGGAAAGATATGCAAGATGTTGTACTTGGTGTGAAGTTAGCATTGGCATGCCTCTCTTTAGACCCAAAAACCAGACCATCAATGCAGGATGTGGCCAATGAGTTTTTGGCTTCTAAGGCACGAATACAGCATTTTGATTTTTTTTTACAGCATTATTGTTCTCTTTGTATACAACTCGGCCTATGTTTTACATAG 360 0.4 MSAATKCDVYSFGVLALETMMGHHPGQLASTLSKPCTQQLLVKDFLDPRNPLPNFGKDMQDVVLGVKLALACLSLDPKTRPSMQDVANEFLASKARIQHFDFFLQHYCSLCIQLGLCFT 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60525g00013 119 SUPERFAMILY Protein kinase-like (PK-like) 5 88 IPR011009 -
Stsc60525g00013 119 PANTHER LEUCINE RICH REPEAT KINASE 2 1 95 - -
Stsc60525g00013 119 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60525g00013 Stsc-Chr60525 77364 79201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60525g00013 4 87 Receptor kinase-like Gene Family AT3G57830 30.435 1.18e-09 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc60525g00013 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60525g00013 - - ahf:112730549 150.984