Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60522g00012 ATGGAGCTTTGTGATCACAACTTATCCATAAAGAAATGCTCTACTTTGTTCACAGAAAGACAAGTGTTAGAGGCTCTATATCAGGTTGTCAATGCACTAAAACTTATCAACGAGAAGAGAATAGCTCATTTAGATGTTAAGCCTGATAATATTTATGTAAAAAATGGTGTATGCAAGCTTGGTGATTTTGGATGTGCAACTCGCCTTGACAATAGCCTCCCAGTTGAGGAGGGAGATGCACGTTATACGCCTCAAGAAATCCTTAATGAGAATTATGATCACCTTGACAAAGTTGATATCTTTTCTTTAGGAGCTTCTATGTATGAATTCATTCGACGATTTCTTTCGCCAGAATCAGGATGTCAATTTTTTAATATTAAAGAAGGAAAGCTTCCACTTTTTCCTGGCCACTCATTACAATTCCAAAACTTGCTTAAGGCCATGATGGATCCTGATCCAGTTGAACGCCCTTCTGCAAGGGAGTTGATAGAGAATTCAATTTTCGACAAGACCATTACAACAACCAAAATTTGA 534 0.3745 MELCDHNLSIKKCSTLFTERQVLEALYQVVNALKLINEKRIAHLDVKPDNIYVKNGVCKLGDFGCATRLDNSLPVEEGDARYTPQEILNENYDHLDKVDIFSLGASMYEFIRRFLSPESGCQFFNIKEGKLPLFPGHSLQFQNLLKAMMDPDPVERPSARELIENSIFDKTITTTKI 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60522g00012 177 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 1 168 - -
Stsc60522g00012 177 FunFam Wee1-like protein kinase 3 172 - -
Stsc60522g00012 177 SUPERFAMILY Protein kinase-like (PK-like) 1 170 IPR011009 -
Stsc60522g00012 177 Gene3D Transferase(Phosphotransferase) domain 1 2 173 - -
Stsc60522g00012 177 SMART serkin_6 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60522g00012 177 Pfam Protein kinase domain 2 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60522g00012 177 ProSitePatterns Serine/Threonine protein kinases active-site signature. 41 53 IPR008271 GO:0004672|GO:0006468
Stsc60522g00012 177 ProSiteProfiles Protein kinase domain profile. 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60522g00012 Stsc-Chr60522 107307 108119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60522g00012 1 170 Core Cell Cycle Gene Families AT1G02970 67.442 3.61e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Stsc60522g00012 Pkinase 1.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60522g00012 K06632 - gmx:547742 284.648