Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60521g00013 ATGCGAAATCAAGAAGGTAGTTCAGTGAAGGAAGAATTCCTGCGAAAATGGATAAGAGGTCTTAGAAGATACAGCTGTGAGAAGAAGAACATGAGCTTCTTGGAGAGAAAGAAAGCCATAAAGCTCTCTGCAGATTTAGCCATGGCTTCCACCAGGGACAAAACCATACGCTGGAGCCAGGCTCTTATTGCCAACGCTGCTTCCGAGAACGTCTGCATAGGATCCTCATCAGCACCAAAGAAGAGCAGCAGAAAGAAGAAGATGATGCTGATGAGAAGGAGTCGGGCGAGGGTGAAGAGCGTGAAGAAAGAGATGTCATCAGCGAGGTGCATAGCGAAGAGGTTGATGGAGAAGAGAACAAGAAAGCTGAAGAATCTGTTGCCAGGTGGAGAATCCATGGAGGATGGGTGTTTGGTTGAAGAAACCCTAGATTACATACAATCCCTCAGAGATCAAATTGAAGTCATGAGATCCCTTCTCACTGCCTCCCAACTCATCATAAACCCATCCTAA 513 0.462 MRNQEGSSVKEEFLRKWIRGLRRYSCEKKNMSFLERKKAIKLSADLAMASTRDKTIRWSQALIANAASENVCIGSSSAPKKSSRKKKMMLMRRSRARVKSVKKEMSSARCIAKRLMEKRTRKLKNLLPGGESMEDGCLVEETLDYIQSLRDQIEVMRSLLTASQLIINPS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60521g00013 170 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 8 161 IPR044660 GO:0006355
Stsc60521g00013 170 CDD bHLH_AtIBH1_like 108 160 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60521g00013 Stsc-Chr60521 68217 69253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60521g00013 4 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 42.614 8.46e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60521g00013 - - gmx:100814789 173.711