Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60521g00010 ATGGGTGTTTTGGATGAGAATCTTCCTGCACTGGCTATGATAGGGTTGCAGTTTCATTATGCAGCGCTTGCAATTTTCACCAGAGCTGCTCTGGTAGAAGGCTTGAGTCCAACCGTCTTTGTTGTTTACAGACAAGCCATTGCTACCTTATCTTTGGCTCCTATGGTCTTTTCCCCTAACCGGATACAATCTTTCAAAGCTTCACTCACTTCAAAGAGCTTCTTCTTGATGTTTGCTACCTCTCTTATTGGAGTAACAGCTAATCAGAATGCATATTTTCAAGGTCTATTCTATGCTTCTTCTACAGCAGCAACTGCAATGAGTAATCTCATACCTGCCTTAACTTTTGTCATAGCAACACTTGTTGGATTTGAGAAAATTGATGTGAAAAGCATGAGAAGCCTTGCAAAGATAGGAGGGACAGTTTGCTGCGTGAGTGGAGCCTTAACCATGGCGCTGCTGAAAGGACATAAGCTCTTAAACATGGACTACTTCCCTAATCATGCTGCCAAACACATCCTCACTGCCACAACTTCAGGTGATGACACCTGGCTTCTTGGCTGCCTATTGCTCTTAGCAAGTAGTGTTTTCTGGTCTTCTTGGATCATCATGCAGGTACCAATTTCTTCACGCTGCCCAGATCACTTGTTATCAACCTTTTGGATGTGTTTATTTGCAGCAGTTCAATCAGCCATCTTTGCACTAATCTATGAACAAGATCTAAAACCATGGAGTCTGCATTCTGGCCTAGAAGTTTCATGCTGCCTATATGCAGGAATTGGAATAGCAGTTAGCTTCTTGATTCAAACATGGTGTATCTCAGAAAGAGGTCCTCTGTACTGTGCAATGTTCAACCCTCTTGCAACAGTCATCACAGCTTTCATTTCCACTACATTCCTACATGAACAGCTCTATGTTGGAAGCTTGGTAGGAGCAATTGGAGTGATTATTGGTTTGTATATTGTACTATGGGGAAAAGCCAAAGAGTACGAAGGAATGAAGCAGAAGAGAAGACAATCAAACTTGGAGGAAGGTGATGATGAGAATGTAACAAGAAGTAGTACTAATAATAATAGCAGTAACAAGATAGATCTAGAAGAACCACTTCTGAGAGAGAAATCAGAAAGCAAGATAGAACCGTGA 1143 0.4164 MGVLDENLPALAMIGLQFHYAALAIFTRAALVEGLSPTVFVVYRQAIATLSLAPMVFSPNRIQSFKASLTSKSFFLMFATSLIGVTANQNAYFQGLFYASSTAATAMSNLIPALTFVIATLVGFEKIDVKSMRSLAKIGGTVCCVSGALTMALLKGHKLLNMDYFPNHAAKHILTATTSGDDTWLLGCLLLLASSVFWSSWIIMQVPISSRCPDHLLSTFWMCLFAAVQSAIFALIYEQDLKPWSLHSGLEVSCCLYAGIGIAVSFLIQTWCISERGPLYCAMFNPLATVITAFISTTFLHEQLYVGSLVGAIGVIIGLYIVLWGKAKEYEGMKQKRRQSNLEEGDDENVTRSSTNNNSSNKIDLEEPLLREKSESKIEP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60521g00010 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 328 - -
Stsc60521g00010 380 MobiDBLite consensus disorder prediction 335 350 - -
Stsc60521g00010 380 MobiDBLite consensus disorder prediction 365 380 - -
Stsc60521g00010 380 Pfam EamA-like transporter family 10 136 IPR000620 GO:0016020
Stsc60521g00010 380 Pfam EamA-like transporter family 186 323 IPR000620 GO:0016020
Stsc60521g00010 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 154 - -
Stsc60521g00010 380 PANTHER WAT1-RELATED PROTEIN 9 336 IPR030184 GO:0016020|GO:0022857
Stsc60521g00010 380 MobiDBLite consensus disorder prediction 335 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60521g00010 Stsc-Chr60521 41478 43297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60521g00010 1 379 Nodulin-like Gene Family AT4G30420 45.692 1.09e-115 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60521g00010 - - gmx:100816384 491.5